| Accession |
SAMC049036 |
| Sample name |
YPO66 |
| Title |
genome of YPO66 |
| Sample type |
Model organism or animal sample |
| Organism |
Equus asinus asinus |
| Description |
We firstly assembled a de novo genome of Kiang, and re-sequenced genomes of another 5 kiangs. Genetic innovations including structural variation and rapidly evolved genes were recapitulated in kiang. To investigate relationship between kiang and domestic donkey, we further re-sequenced the whole genomes from 93 domestic donkeys across the world. In contrast to previous viewpoint, rare genetic introgression was found between Kiang and domestic donkey, indicating minor genetic contribution of kiang to domestic donkey. We found common occurrence of soft selective sweep and revealed rapid evolution of HIF-pathway for high altitude adaptation of Tibetan domestic donkey. |
| Attributes |
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Breed
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Strain
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Age
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null null(s)
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Biomaterial provider
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Kunming institute of zoology, CAS
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Sex
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female
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Tissue
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blood
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Birth date
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Birth location
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Breed history
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Breed method
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Cell line
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Cell subtype
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Cell type
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Collected by
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Culture collection
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Death date
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Development stage
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Disease
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Disease stage
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Genotype
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Geographic location
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Growth protocol
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Health state
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Isolation source
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Latitude and longitude
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Phenotype
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Type
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Specimen voucher
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Storage conditions
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Stud book number
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Treatment
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| Release date |
2020-01-01 |
| BioProject Accession |
PRJCA001131 |
| Submitter |
Dong-Dong Wu (wudongdong@mail.kiz.ac.cn)
|
| Organization |
Kunming Institute of Zoology, Chinese Academy of Sciences |
| Submission date |
2018-11-21 |
