| Accession |
SAMC108142 |
| Sample name |
Xiaomi_PacBio |
| Title |
PacBio sequencing of Xiaomi |
| Sample type |
Plant sample |
| Organism |
Setaria italica |
| Description |
Xiaomi is an extremly short life cycle EMS mutagenized mutant which shows growth characters similar to those of Arabidopsis, producing up to six generations per year and growing to ~26 cm tall. To promote the use Xiaomi as a model plant, we sequenced and assembled the Xiaomi genome by combining single molecule real-time (SMRT) sequencing (PacBio RSII and Sequel), short read paired-end sequencing (Illumina Hi-Seq) and chromosome conformation capture sequencing (Hi-C). |
| Attributes |
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Cultivar
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Xiaomi
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Biomaterial provider
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Xingchun Wang
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Tissue
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whole plant
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Age
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Cell line
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Collected by
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Collection date
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Culture collection
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Development stage
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Disease
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Disease stage
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Genotype
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Growth protocol
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Height or length
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Isolation source
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Latitude and longitude
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Phenotype
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Population
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Type
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Sex
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Specimen voucher
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Temperature
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Treatment
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| Release date |
2020-06-23 |
| BioProject Accession |
PRJCA001730 |
| Submitter |
Xingchun Wang (wxingchun@163.com)
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| Organization |
Shanxi Agricultural University |
| Submission date |
2019-09-17 |
