样本编号 SAMC1714660
外部数据库编号 GSA-Human: HRS192166
样品名称 ATAC_Day4.DP.rep1
样本标题 ATAC_Day4.DP.rep1
样品类型 Human sample
物种名称 Homo sapiens
描述信息 ATAC-seq for Differentiating cells
样本属性
分离株名称 not collected
年龄
实验材料提供者 Southern Medical University (SMU), Xiao-yang Zhao Lab
性别 not applicable
组织器官 pluripotent stem cell
疾病名称
细胞系
细胞亚型
细胞类型
收集/保存方法
发育阶段
疾病分期
血统性(民族)
健康状况
核型
表型
人口
种族(人种)
类型
处理方法
用户自定义属性
发布日期 2021-06-17
项目编号 PRJCA005395
提交者 xinyan  yang  (zhaoxiaoyang@smu.edu.cn)
提交单位 Southern Medical University
提交日期 2023-06-18

样本包含数据信息

资源名称 描述
GSA-Human (1) -
HRA000925  (Open Access) In vitro induction of human primordial germ cell-like cells (hPGCLCs) provides an ideal platform to recapitulate hPGC development. However, the detailed molecular mechanisms regulating the induction of hPGCLCs remain largely uncharacterized. Here, we profiled the chromatin accessibility and transcriptome dynamics throughout the process of hPGCLC induction. Genetic ablation of SOX15 indicated the crucial roles of SOX15 in the maintenance of hPGCLCs. Mechanistically, SOX15 exerted its roles via suppressing somatic gene expression and sustaining latent pluripotency. Finally, a stepwise switch of OCT4/SOX2, OCT4/SOX17, and OCT4/SOX15 binding motifs were found to be enriched in closed-to-open regions of human embryonic stem cells, and early- and late-stage hPGCLCs, respectively. Collectively, our data characterized the chromatin accessibility and transcriptome landscapes throughout hPGCLC induction and defined the SOX15-mediated regulatory networks underlying this process.
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