样本编号	SAMC2526174
外部数据库编号	GSA-Human: HRS543853
样品名称	healthy_15_pre
样本标题	healthy
样品类型	Human sample
物种名称	Homo sapiens
描述信息	healthy_15
样本属性	*该样本包含更多受控访问信息，请通过GSA-Human系统申请项目HRA003821数据获取。
发布日期	2023-02-25
项目编号	PRJCA013939
提交者	Xun Lan (xlan@tsinghua.edu.cn)
提交单位	Tsinghua University
提交日期	2023-06-18

样本包含数据信息

资源名称	描述
GSA-Human (1)	-
HRA003821 (Controlled Access)	Patterns in whole-genome-wide features of cell-free DNA (cfDNA) in human plasma provide a noninvasive diagnostic approach for cancer detection. However, an integrated analysis toolkit for whole-genome-wide features of cfDNA (INAC) is lacking. In this study, these cfDNA whole-genome features, including cfDNA quality control, fragment size, fragment size ratio, copy number variation, transcription start site (TSS) relative coverage, and promoter fragmentation entropy, were estimated by using the INAC toolkit to analyze a collected independent dataset (50 patients with gastric cancer and 50 healthy controls) with ~10x sequence depth.

资源名称

描述

GSA-Human (1)

HRA003821 (Controlled Access)

Patterns in whole-genome-wide features of cell-free DNA (cfDNA) in human plasma provide a noninvasive diagnostic approach for cancer detection. However, an integrated analysis toolkit for whole-genome-wide features of cfDNA (INAC) is lacking. In this study, these cfDNA whole-genome features, including cfDNA quality control, fragment size, fragment size ratio, copy number variation, transcription start site (TSS) relative coverage, and promoter fragmentation entropy, were estimated by using the INAC toolkit to analyze a collected independent dataset (50 patients with gastric cancer and 50 healthy controls) with ~10x sequence depth.