ChickenSD

ChickenSD / Individual SNP / ggaS0042001053366

Detail information of ggaS0042001053366

1.General Information

SNP ID: ggaS0042001053366
Organism: Gallus gallus
Individual: 16S_L5_I023

2.Allele information

Platform: SOLEXA
Method: sequence
SNP Class: SNP
Genotype: G

3.Reference Map information

Chrom Position Reference 16S_L5_I023
chr11 1617 C G

4.Gene information

Var ID Gene ID Transcript ID Gene Symbol Variant Effect Biotype cDNA Position Allele Change Protein ID Protein Position Residue Change
ggaS0042001053366 - intergenic_variant => =>

5.Individual Genotype

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Individual Genotype
100S C
101S_L1_I028 C
102S_L3_I037 C
103S S
104S_L7_I029 C
105S_L3_I039 C
106S_L6_I030 C
107S_L2_I031 S
108S_L6_I032 S
109S_L5_I033 C
10S_L1_I052 C
110S_L4_I034 C
111S_L3_I047 C
112S_L3_I035 C
113S_L1_I036 C
114S_L3_I037 S
116S_L6_I038 C
117S_L2_I039 C
118S_L4_I040 C
119S_L3_I041 S
11S C
120S_L1_I041 C
121S_L3_I042 C
122S_L4_I043 C
123S_L4_I044 S
124S_L2_I048 C
125S_L3_I050 C
126S_L3_I051 S
127S_L2_I045 C
128S_L1_I042 S
129S_L3_I043 C
12S_L4_I011 C
130S_L4_I044 S
131S_L2_I045 C
132S_L2_I046 C
133S_L8_I046 C
134S_L2_I047 S
135S_L3_I048 S
13S_L7_I012 S
14S_L2_I021 C
15S_L6_I022 S
17S_L3_I024 C
18833 C
18S_L7_I025 S
19297 C
19912 C
19S_L4_I026 C
1S C
20736 C
20S_L7_I027 S
21S_L6_I028 S
22S_L6_I029 S
23S_L2_I030 C
24S_L4_I031 C
25S_L3_I032 S
26S S
27S_L4_I034 S
28S_L4_I035 S
29S_L3_I036 C
2S S
30S_L2_I037 C
31S_L3_I038 C
32S_L1_I039 C
33S C
35S_L5_I041 S
36S_L5_I042 C
37S_L2_I043 S
38S_L6_I044 C
39S_L6_I053 S
3S_L4_I003 C
40S_L2_I054 S
41S_L5_I045 C
42S_L3_I055 C
43S S
44S_L4_I001 S
45S_L2_I002 C
46S_L4_I003 C
47S_L3_I046 C
48S_L1_I004 C
49S_L1_I005 S
4S_L4_I004 S
50S_L1_I047 S
51S_L6_I048 C
52S_L2_I050 C
53S_L2_I006 C
54S_L2_I007 C
55S_L1_I008 C
56S_L1_I010 C
57S_L3_I046 S
58S_L4_I051 C
59S_L5_I052 C
5S C
60S_L5_I053 C
61S_L8_I054 C
62S_L8_I055 S
63S_L5_I056 S
64S_L4_I001 S
65S_L5_I002 C
66S_L2_I003 S
67S_L1_I011 C
68S_L3_I012 C
69S C
6S S
70S C
71S_L3_I023 C
72S_L1_I024 C
73S_L1_I025 S
74S_L4_I026 C
75S_L3_I027 C
76S_L1_I028 C
77S_L4_I029 C
78S_L4_I030 C
79S_L2_I031 S
7S_L4_I007 C
80S_L3_I004 C
81S_L1_I005 S
82S S
83S_L3_I033 C
84S_L5_I006 S
85S_L5_I007 S
86S_L5_I008 C
87S_L5_I010 S
88S_L4_I011 S
89S_L6_I012 C
90S_L4_I021 C
91S_L4_I022 S
92S_L5_I023 S
93S_L7_I024 S
95S_L8_I025 S
96S_L4_I026 S
97S_L8_I027 S
98S_L3_I034 C
99S_L2_I035 S
9S C
A1 C
A10 C
A12 C
A14 S
A3 S
A8 S
BKL2 C
BLB1_L2_I007 C
BLB2_L2_I008 C
BLO1 C
BLO11 C
BLO15 C
BLO2 C
BLO3_L4_I022 C
BOJA2 C
BYW3_L3_I033 C
BYW5_L2_I010 C
GVF C
India1 C
India11 S
India13 S
India15 C
India17 S
India19 C
India21 S
India23 C
India25 C
India27 C
India29 S
India31 C
India33 S
India35 C
India37 C
India39 C
India41 S
India43 S
India45 C
India47 S
India5 C
India51 S
India55 S
India57 C
India59 S
India61 C
India7 C
India9 S
L2 S
N1 C
N11 C
N13 S
N18 C
N3 C
N5 S
N7 S
N8 S
S-f1_L4_I106 C
S-f2_I107 C
S-f3_I108 C
S-f4_L4_I109 C
S-m1_I101 C
S-m2_I102 C
S-m3_I103 S
S-m4_L2_I104 C
S-m5_I105 C
S6 C
SAMN02486156 S
SAMN02486157 C
SAMN02486158 C
SAMN02486159 S
SAMN02486160 C
SAMN02486161 C
SAMN02486162 S
SAMN02486163 C
SAMN02486164 C
SAMN02486165 C
SAMN02486166 S
SAMN02486167 S
Silkia S
T2 C
T3 C
T5 C
TD1 C
TD12 C
TD15 C
TD22 C
TD27 C
TD30 C
TD6 S
TD9 S
Tibet C
Xcelris_10 C
Xcelris_101 C
Xcelris_104 C
Xcelris_105 C
Xcelris_10A C
Xcelris_10B S
Xcelris_112 S
Xcelris_113 C
Xcelris_114 C
Xcelris_11B C
Xcelris_12 C
Xcelris_120 C
Xcelris_127 C
Xcelris_128 C
Xcelris_129 C
Xcelris_12A S
Xcelris_13 S
Xcelris_137 C
Xcelris_13B C
Xcelris_14 S
Xcelris_141 C
Xcelris_142 C
Xcelris_143 C
Xcelris_144 C
Xcelris_14A S
Xcelris_14B C
Xcelris_174 C
Xcelris_175 C
Xcelris_176 S
Xcelris_1A C
Xcelris_1B C
Xcelris_219 C
Xcelris_221 S
Xcelris_222 C
Xcelris_224 C
Xcelris_226 C
Xcelris_227 S
Xcelris_275 C
Xcelris_276 C
Xcelris_278 S
Xcelris_279 C
Xcelris_280 C
Xcelris_282 G
Xcelris_2A S
Xcelris_2B C
Xcelris_331 S
Xcelris_332 G
Xcelris_333 S
Xcelris_335 C
Xcelris_336 S
Xcelris_339 C
Xcelris_340 C
Xcelris_341 S
Xcelris_377 C
Xcelris_378 S
Xcelris_379 C
Xcelris_380 S
Xcelris_381 C
Xcelris_382 C
Xcelris_383 C
Xcelris_384 S
Xcelris_385 S
Xcelris_392 C
Xcelris_394 C
Xcelris_44 S
Xcelris_4A C
Xcelris_4B C
Xcelris_5A C
Xcelris_5B S
Xcelris_67 S
Xcelris_6A C
Xcelris_7 C
Xcelris_77 S
Xcelris_8 C
Xcelris_84 S
Xcelris_8A C
Xcelris_8B C
Xcelris_90 C
Xcelris_97 C
Xcelris_98 C
Xcelris_MT-134 S
Xcelris_MT-18 S
Xcelris_MT-38 G
Xcelris_MT-46 C
Xcelris_MT-48 S
Xcelris_MT-6 C
Xcelris_MT-85 S
Xcelris_MT-9 C
Xcelris_MT-99 C
Y1-f1_L5_I119 C
Y1-f2_L6_I121 C
Y1-f3_L7_I101 C
Y1-m1_L6_I120 C
Y1-m2_L4_I122 C
Y1-m3_L7_I123 S
Y1-m4_I124 C
Y1-m5_L7_I102 C
YPt565 C
YPt601 S
YPt604 C
YPt609 S
YPt610 S
YPt637 C
YPt641 S
YPt648 C
You1 C
You3_L7_I1000005 C
Ypt566 S
Ypt567 C
Ypt568 C
Ypt569 C
Ypt570 C
Ypt571 C
Ypt572 C
Ypt573 C
Ypt574 C
Ypt575 C
Ypt576 C
Ypt577 C
Ypt578 C
Ypt579 C
Ypt580 C
Ypt581 C
Ypt582 C
Ypt583 C
Ypt584 C
Ypt585 S
Ypt586 C
Ypt587 C
Ypt588 C
Ypt589 C
Ypt590 C
Ypt591 S
Ypt592 C
Ypt593 S
Ypt594 C
Ypt595 C
Ypt596 C
Ypt597 S
Ypt598 C
Ypt599 C
Ypt600 C
Ypt602 S
Ypt603 S
Ypt606 C
Ypt607 C
Ypt608 C
Ypt622 C
Ypt623 C
Ypt624 S
Ypt626 C
Ypt638 C
Ypt640 C
Ypt642 S
Ypt643 C
Ypt645 C
Ypt646 C
Yt516 C
Yt517 C
Yt518 S
Yt519 C
Yt520 C
Yt521 C
Yt522 C
Yt523 S
Yt524 C
Yt525 C
Yt526 C
Yt527 C
Yt528 C
Yt529 C
Yt530 S
Yt531 C
Yt536 C
Yt538 S
Yt539 C
Yt540 C
ZJ1 S
ZJ2 S
ZJ3 C
ZJ4 C
india3 S
india49 S
production C
yp914ypt C
ypt169_L3_I011 S
ypt170_L2_I012 S
ypt171_L2_I021 C
ypt173_L2_I022 C
ypt175_L2_I023 S
ypt2041_L6_I002 C
ypt2043_L1_I037 C
ypt2051_L3_I003 C
ypt2053_L6_I004 C
ypt2063_L6_I005 S
ypt2069_L6_I006 S
ypt2071_L1_I038 C
ypt2082 C
ypt2086 S
ypt2087 C
ypt2091 C
ypt2092 S
ypt2093 C
ypt2094 C
ypt2095 C
ypt2098 C
ypt2100 C
ypt2101 C
ypt2102 C
ypt2103 C
ypt2105 S
ypt2106 C
ypt2107 C
ypt2108 C
ypt2109 C
ypt2110 C
ypt2111 C
ypt2112 C
ypt2114 S
ypt2115 C
ypt2116 S
ypt2117 S
ypt2118 S
ypt2119 S
ypt2120 S
ypt2121 S
ypt2122 S
ypt2124_L4_I052 C
ypt2126_L3_I053 C
ypt2127_L1_I036 C
ypt2128_L6_I054 C
ypt2144_L6_I055 S
ypt2145_L6_I056 S
ypt2146_L6_I001 S
ypt2163 S
ypt2164 C
ypt2165 C
ypt2166 C
ypt2167 S
ypt2168 S
ypt2169 C
ypt2170 C
ypt2171 C
ypt2172 C
ypt2173 C
ypt2174 C
ypt2175 S
ypt2176 C
ypt2177 C
ypt2178 S
ypt217_L2_I024 C
ypt2184 C
ypt2185 C
ypt2186 C
ypt2187 C
ypt2189 C
ypt2190 C
ypt2191 S
ypt219_L3_I025 C
ypt2200 S
ypt2201 S
ypt2205 C
ypt2209 C
ypt220_L2_I026 C
ypt2214 C
ypt2215 C
ypt2216 C
ypt2217 C
ypt2218 S
ypt2219 S
ypt221_L3_I042 C
ypt2220 C
ypt2221 C
ypt2222 S
ypt222_L3_I027 C
ypt2437 C
ypt2438 C
ypt2439 S
ypt2440 S
ypt2441 C
ypt2442 C
ypt2443 C
ypt2444 C
ypt2445 C
ypt2446 C
ypt2447 S
ypt2448 C
ypt2449 C
ypt2454 C
ypt2459 S
ypt2468 C
ypt2496 C
ypt2497 C
ypt2498 C
ypt2499 S
ypt2500 C
ypt2503 C
ypt2504 S
ypt2507 C
ypt2512 S
ypt2516 C
ypt2521 C
ypt2523 S
ypt2534 C
ypt2541 C
ypt2543 C
ypt2544 S
ypt2545 S
ypt2546 S
ypt2547 C
ypt2552 S
ypt2562 S
ypt2563 C
ypt2569 C
ypt2570 S
ypt2571 C
ypt2572 C
ypt2573 C
ypt2574 C
ypt2575 C
ypt2579 S
ypt258_L3_I028 S
ypt2598 S
ypt259_L2_I029 C
ypt2601 C
ypt2606 S
ypt2608 S
ypt2615 S
ypt2622 S
ypt2623 C
ypt2624 S
ypt2625 C
ypt2627 C
ypt2628 C
ypt2629 C
ypt262_L3_I030 S
ypt2630 C
ypt2636 S
ypt2638 C
ypt263_L3_I031 S
ypt2640 C
ypt2641 S
ypt2643 C
ypt2644 C
ypt2646 S
ypt264_L3_I032 S
ypt2650 C
ypt2653 C
ypt2656 C
ypt2657 C
ypt2658 S
ypt2661 S
ypt2664 S
ypt2665 C
ypt2669 C
ypt2670 C
ypt2671 C
ypt2672 C
ypt2673 C
ypt2678 S
ypt2706 C
ypt2722 C
ypt2724 C
ypt2729 C
ypt2733 C
ypt2739 S
ypt2740 S
ypt2745 S
ypt2746 C
ypt2760 S
ypt2761 C
ypt2765 C
ypt2766 C
ypt2775 S
ypt2780 C
ypt2781 C
ypt2782 C
ypt2783 S
ypt2784 C
ypt2785 C
ypt2786 C
ypt2787 C
ypt2788 C
ypt2789 S
ypt2790 C
ypt2791 C
ypt2792 S
ypt2799 S
ypt2800 C
ypt2808 S
ypt2810 S
ypt2812 C
ypt2813 S
ypt2814 S
ypt2815 C
ypt2816 C
ypt2817 S
ypt2819 S
ypt2821 S
ypt2822 S
ypt2823 S
ypt2824 S
ypt2825 C
ypt2826 S
ypt2827 C
ypt2828 C
ypt2831 C
ypt2832 C
ypt2842 S
ypt2843 S
ypt2849 S
ypt2859 C
ypt2860 C
ypt2861 C
ypt2862 C
ypt2863 C
ypt2870 C
ypt2871 C
ypt2887 C
ypt2888 C
ypt2889 C
ypt2890_L3_I040 C
ypt2891_L3_I041 C
ypt2892 C
ypt2893_L3_I025 S
ypt2894 S
ypt2895_L3_I026 C
ypt2902 S
ypt2909 C
ypt2910 S
ypt2911 C
ypt2912 C
ypt2918 C
ypt2929 S
ypt2930 C
ypt3001 S
ypt3002 C
ypt3003 C
ypt3004 C
ypt3005 S
ypt3006 S
ypt3007 C
ypt3008 S
ypt3009 C
ypt3010 S
ypt3011 S
ypt3012 C
ypt3016 S
ypt3017 C
ypt3028 C
ypt3038 S
ypt3040 S
ypt3041 C
ypt3042 C
ypt3043 S
ypt3044 C
ypt3045 C
ypt3046 S
ypt3047 S
ypt3050 S
ypt3051 C
ypt3052 C
ypt3061 C
ypt3069 C
ypt3072 C
ypt3133 C
ypt3134 S
ypt3135 C
ypt3136 C
ypt3137 C
ypt3138 S
ypt3139 C
ypt3140 C
ypt3141 S
ypt3142 C
ypt3143 C
ypt3144_L3_I039 S
ypt3145 C
ypt3146 C
ypt3149_L2_I034 C
ypt3150_L8_I023 S
ypt3159_L6_I035 S
ypt3160_L8_I024 S
ypt3162_L6_I036 C
ypt3179_L8_I025 C
ypt3180 C
ypt3181_L7_I038 C
ypt3182_L1_I039 C
ypt3189_L1_I040 C
ypt3190_L8_I026 C
ypt3191_L2_I041 C
ypt3193_L1_I027 C
ypt3195_L1_I042 S
ypt3196_L2_I043 S
ypt3197_L1_I044 C
ypt3198_L2_I045 C
ypt3204_L7_I046 C
ypt3205_L2_I047 C
ypt3206_L1_I048 C
ypt3207_L6_I050 C
ypt3210_L6_I051 S
ypt3211_L6_I052 S
ypt3212_L4_I028 C
ypt3213_L8_I029 C
ypt3219_L1_I030 C
ypt3220_L1_I031 C
ypt3221_L1_I032 C
ypt3222_L1_I033 C
ypt3224_L8_I043 C
ypt3225_L2_I053 C
ypt3226_L3_I044 S
ypt3228-7_L1_I034 S
ypt3229_L8_I045 C
ypt3238_L3_I046 C
ypt3239_L1_I035 S
ypt3240_L6_I054 C
ypt3241_L6_I055 C
ypt3243_L8_I047 C
ypt3245 C
ypt3246_L6_I050 S
ypt3247_L6_I051 C
ypt3257_L1_I056 C
ypt3258_L3_I001 C
ypt3259_L6_I002 S
ypt3260_L6_I003 C
ypt3261_L7_I004 C
ypt3262_L7_I005 C
ypt3269_L7_I006 S
ypt3270_L1_I007 C
ypt3271_L7_I008 C
ypt3272_L7_I010 C
ypt3274A_L7_I011 S
ypt3275_L1_I012 C
ypt3276_L7_I021 C
ypt3277_L6_I027 S
ypt3278_L3_I028 C
ypt3289_L8_I021 C
ypt4001 G
ypt47_L2_I029 S
ypt50_L2_I030 C
ypt53_L2_I032 S
ypt55_L1_I033 G
ypt890 S
ypt891 C
ypt896_L2_I047 S
ypt897_L3_I048 C
ypt898 C
ypt899_L6_I051 S
ypt901_L1_I052 C
ypt902_L1_I053 S
ypt903_L2_I054 C
ypt904_L4_I055 S
ypt905_L6_I056 C
ypt906_L3_I001 C
ypt907_L6_I002 C
ypt908_L1_I003 S
ypt909_L5_I004 S
ypt910_L3_I005 C
ypt911_L6_I006 C
ypt912 S
ypt913 C
ypt915 C
ypt917 C
ypt918_L3_I007 S
ypt919_L4_I008 S
ypt920_L5_I010 C
ypt922_L4_I012 C
ypt923_L2_I051 S
ypt924_L3_I021 C
ypt925_L2_I022 S
ypt926_L2_I023 C
ypt928 C
ypt929 C
ypt930 C
ypt931 C
ypt932 S
ypt933 S
ypt934x G
ypt935 C
ypt936 S
ypt937 C
ypt938x S
ypt939_L5_I025 C
ypt940_L4_I026 C
ypt941_L5_I027 C
ypt942_L7_I028 C
ypt943 C
ypt944_L3_I030 C
ypt945_L4_I031 C
ypt946_L4_I032 S
ypt947_L5_I033 C
ypt948_L2_I034 C
ypt949_L3_I035 C
ypt950_L5_I036 S
ypt951 C
ypt952 S
ypt953 S
ypt954 C
ypt955 S
ypt956x C
ypt957 C
ypt958 C
ypt959 S
ypt960 C
ypt961 C
ypt962 C
ypt963 C
ypt964 C
ypt965 C
ypt966 C
ypt971 C
ypt972x C
ypt973_L4_I037 C
ypt974 C
ypt975_L8_I039 C
ypt976_L7_I040 C
ypt977_L2_I041 C
ypt978_L2_I052 C
ypt979_L6_I042 C
ypt980_L3_I043 C
ypt981_L2_I044 C
ypt982_L4_I045 S
ypt984 C
yptwj C
147209 C
147830 C
GLF_denovo C
Gallus_Sonneriatii_d S
Ypt4000 C
Ypt4879 S
Ypt4880 C