ChickenSD

ChickenSD / Basic Search

General Information:

Chromosome
Reference Location
start end

Individual information

Populations
Individual

Consequence Type

HIGH
transcript_ablation
splice_acceptor_variant
splice_donor_variant
stop_gained
frameshift_variant
stop_lost
start_lost
transcript_amplification
MODERATE
inframe_insertion
inframe_deletion
missense_variant
protein_altering_variant
regulatory_region_ablation
MODIFIER
coding_sequence_variant
mature_miRNA_variant
5_prime_UTR_variant
3_prime_UTR_variant
non_coding_transcript_exon_variant
intron_variant
NMD_transcript_variant
non_coding_transcript_variant
upstream_gene_variant
downstream_gene_variant
TFBS_ablation
TFBS_amplification
TF_binding_site_variant
regulatory_region_amplification
feature_elongation
regulatory_region_variant
feature_truncation
intergenic_variant
LOW
splice_region_variant
incomplete_terminal_codon_variant
stop_retained_variant
synonymous_variant

Associated Gene Information

Gene Name
(e.g. CDHR3 or ENSGALG00000008109 )
UniprotKB
(e.g. P84247)
Biotype
mRNA　 rRNA　 miRNA snoRNA
Ontology Term
(e.g. GO:0005634)
Ontology Key Words
(e.g. nucleus )