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  • Basic Information

    Nucleotide Content

    Codon

      AU-rich     GCp1     GCp2     GC-rich     Pro-diversity     Pro-robustness    

    To help understand the functional indications of the codon positions and their relatedness, this renovated table divides GC/AG sensitivity vs. insensitivity, amino acid diversity vs. simplicity, and mutation sensitivity vs. tolerance (Jun Yu, 2007). In specific, this table is divided into four quarters: AU-rich, GCp1, GCp2 and GC-rich quarter or two halves of the pro-diversity (transversion-sensitive) half and the pro-robustness (content-insensitive) half (Jun Yu, 2007).

      AU-rich     GCp1     GCp2     GC-rich     Pro-diversity     Pro-robustness   

    To help understand the functional indications of the codon positions and their relatedness, this renovated table divides GC/AG sensitivity vs. insensitivity, amino acid diversity vs. simplicity, and mutation sensitivity vs. tolerance (Jun Yu, 2007). In specific, this table is divided into four quarters: AU-rich, GCp1, GCp2 and GC-rich quarter or two halves of the pro-diversity (transversion-sensitive) half and the pro-robustness (content-insensitive) half (Jun Yu, 2007).

    Amino Acid

      Legend:     aliphatic     sulfur     acidic     aromatic     basic     amide    small hydroxy   

    Coding Potential

    Fickett Score CPC2 Coding Probability CPC2 Coding Label LGC Coding Potential Score LGC Coding Label

    Physicochemical Property

    MW SA RV kdHydrophobicity wwHydrophobicity hhHydrophobicity Positive Negative Neutral Alpha Beta

    Phase Separation

    PLAAC and Pi-Pi predictor

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