Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

siRNAEfficacyDB

General information

URL: https://cellknowledge.com.cn/siRNAEfficacy
Full name:
Description: siRNAEfficacyDB is a comprehensive database that integrates experimentally validated siRNA efficacy data. This database contains 3,544 siRNA records, covering 42 target genes and 5 cell lines and provides detailed information on siRNA sequences, target genes, inhibition efficiencies, experimental techniques, cell lines, siRNA concentrations, and incubation times. siRNAEfficacyDB offers a user-friendly web interface that makes it easy to query, browse and analyse data, enabling efficient access to siRNA-related information.
Year founded: 2024
Last update: 2024-11-14
Version: v1.0
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
RNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Chengdu University of Traditional Chinese Medicine
Address: Innovative Institute of Chinese Medicine and Pharmacy, Academy for Interdiscipline, Chengdu University of Traditional Chinese Medicine, Chengdu, China
City: Chengdu
Province/State: Sichuan
Country/Region: China
Contact name (PI/Team): Yang Zhang
Contact email (PI/Helpdesk): yangzhang@cdutcm.edu.cn

Publications

39541343
siRNAEfficacyDB: An experimentally supported small interfering RNA efficacy database. [PMID: 39541343]
Yang Zhang, Ting Yang, Yu Yang, Dongsheng Xu, Yucheng Hu, Shuo Zhang, Nanchao Luo, Lin Ning, Liping Ren

Small interfering RNA (siRNA) has revolutionised biomedical research and drug development through precise post-transcriptional gene silencing technology. Despite its immense potential, siRNA therapy still faces technical challenges, such as delivery efficiency, targeting specificity, and molecular stability. To address these challenges and facilitate siRNA drug development, we have developed siRNAEfficacyDB, a comprehensive database that integrates experimentally validated siRNA efficacy data. This database contains 3544 siRNA records, covering 42 target genes and 5 cell lines. It provides detailed information on siRNA sequences, target genes, inhibition efficiencies, experimental techniques, cell lines, siRNA concentrations, and incubation times. siRNAEfficacyDB offers a user-friendly web interface that makes it easy to query, browse and analyse data, enabling efficient access to siRNA-related information. In summary, siRNAEfficacyDB provides a useful data foundation for siRNA drug design and optimisation, serving as a valuable resource for advancing computer-aided siRNA design research and nucleic acid drug development. siRNAEfficacyDB is freely available at https://cellknowledge.com.cn/siRNAEfficacy for non-commercial use.

IET Syst Biol. 2024:18(6) | 2 Citations (from Europe PMC, 2026-06-06)

Ranking

All databases:
6115/6932 (11.8%)
Interaction:
1084/1202 (9.9%)
Gene genome and annotation:
1838/2040 (9.951%)
6115
Total Rank
1
Citations
0.5
z-index

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Record metadata

Created on: 2025-07-01
Curated by:
Yuhao Zeng [2025-08-20]
Jinbiao Wang [2025-08-02]
Yiran Zhan [2025-07-01]