Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

HGVbaseG2P

General information

URL: http://www.hgvbaseg2p.org/
Full name: The Human Genome Variation database
Description: The Human Genome Variation database of Genotype to Phenotype information (HGVbaseG2P) is a new central database for summary-level findings produced by human genetic association studies, both large and small.
Year founded: 2009
Last update: 2015-03-27
Version: v1.0
Accessibility:
Accessible
Country/Region: United Kingdom

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: University of Leicester
Address: Department of Genetics, University of Leicester, University Road, Leicester, LE1 7RH, UK
City: Leicester
Province/State:
Country/Region: United Kingdom
Contact name (PI/Team): Anthony J. Brookes
Contact email (PI/Helpdesk): ajb97@leicester.ac.uk

Publications

18948288
HGVbaseG2P: a central genetic association database. [PMID: 18948288]
Thorisson GA, Lancaster O, Free RC, Hastings RK, Sarmah P, Dash D, Brahmachari SK, Brookes AJ.

The Human Genome Variation database of Genotype to Phenotype information (HGVbaseG2P) is a new central database for summary-level findings produced by human genetic association studies, both large and small. Such a database is needed so that researchers have an easy way to access all the available association study data relevant to their genes, genome regions or diseases of interest. Such a depository will allow true positive signals to be more readily distinguished from false positives (type I error) that fail to consistently replicate. In this paper we describe how HGVbaseG2P has been constructed, and how its data are gathered and organized. We present a range of user-friendly but powerful website tools for searching, browsing and visualizing G2P study findings. HGVbaseG2P is available at http://www.hgvbaseg2p.org.

Nucleic Acids Res. 2009:37(Database issue) | 49 Citations (from Europe PMC, 2026-04-04)

Ranking

All databases:
3213/6932 (53.664%)
Genotype phenotype and variation:
467/1012 (53.953%)
3213
Total Rank
49
Citations
2.882
z-index

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Record metadata

Created on: 2015-07-27
Curated by:
Chunlei Yu [2016-04-17]
Chunlei Yu [2015-11-19]