Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CLDB

General information

URL: http://bioinformatics.hsanmartino.it/hypercldb/
Full name: Cell Line Data Base
Description: The Cell Line Data Base (CLDB) is a well-known reference information source on human and animal cell lines including information on more than 6000 cell lines.
Year founded: 2009
Last update: 2015-03-01
Version: v4.0
Accessibility:
Accessible
Country/Region: Italy

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: National Research Council
Address: Genova, Italy
City: Genova
Province/State:
Country/Region: Italy
Contact name (PI/Team): Paolo Romano
Contact email (PI/Helpdesk): paolo.romano@istge.it

Publications

18927105
Cell Line Data Base: structure and recent improvements towards molecular authentication of human cell lines. [PMID: 18927105]
Romano P, Manniello A, Aresu O, Armento M, Cesaro M, Parodi B.

The Cell Line Data Base (CLDB) is a well-known reference information source on human and animal cell lines including information on more than 6000 cell lines. Main biological features are coded according to controlled vocabularies derived from international lists and taxonomies. HyperCLDB (http://bioinformatics.istge.it/hypercldb/) is a hypertext version of CLDB that improves data accessibility by also allowing information retrieval through web spiders. Access to HyperCLDB is provided through indexes of biological characteristics and navigation in the hypertext is granted by many internal links. HyperCLDB also includes links to external resources. Recently, an interest was raised for a reference nomenclature for cell lines and CLDB was seen as an authoritative system. Furthermore, to overcome the cell line misidentification problem, molecular authentication methods, such as fingerprinting, single-locus short tandem repeat (STR) profile and single nucleotide polymorphisms validation, were proposed. Since this data is distributed, a reference portal on authentication of human cell lines is needed. We present here the architecture and contents of CLDB, its recent enhancements and perspectives. We also present a new related database, the Cell Line Integrated Molecular Authentication (CLIMA) database (http://bioinformatics.istge.it/clima/), that allows to link authentication data to actual cell lines.

Nucleic Acids Res. 2009:37(Database issue) | 101 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
2061/6895 (70.123%)
Metadata:
195/719 (73.018%)
Standard ontology and nomenclature:
90/238 (62.605%)
2061
Total Rank
99
Citations
6.188
z-index

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Record metadata

Created on: 2015-07-27
Curated by:
Mengwei Li [2016-03-31]