Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

Gallus GBrowse

General information

URL: http://birdbase.net/cgi-bin/gbrowse/gallus/
Full name: A Unified Genomic Database for the Chicken
Description: Gallus GBrowse provides online access to genomic and other information about the chicken, Gallus gallus.
Year founded: 2008
Last update: 2007-10-11
Version:
Accessibility:
Unaccessible
Country/Region: United States

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: University of Delaware
Address: Newark, DE 19706
City: Newark
Province/State: DE
Country/Region: United States
Contact name (PI/Team): Carl J. Schmidt
Contact email (PI/Helpdesk): schmidtc@udel.edu

Publications

17933775
Gallus GBrowse: a unified genomic database for the chicken. [PMID: 17933775]
Schmidt CJ, Romanov M, Ryder O, Magrini V, Hickenbotham M, Glasscock J, McGrath S, Mardis E, Stein LD.

Gallus GBrowse (http://birdbase.net/cgi-bin/gbrowse/gallus/) provides online access to genomic and other information about the chicken, Gallus gallus. The information provided by this resource includes predicted genes and Gene Ontology (GO) terms, links to Gallus In Situ Hybridization Analysis (GEISHA), Unigene and Reactome, the genomic positions of chicken genetic markers, SNPs and microarray probes, and mappings from turkey, condor and zebra finch DNA and EST sequences to the chicken genome. We also provide a BLAT server (http://birdbase.net/cgi-bin/webBlat) for matching user-provided sequences to the chicken genome. These tools make the Gallus GBrowse server a valuable resource for researchers seeking genomic information regarding the chicken and other avian species.

Nucleic Acids Res. 2008:36(Database issue) | 8 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
6191/6895 (10.225%)
Expression:
1236/1347 (8.315%)
6191
Total Rank
8
Citations
0.471
z-index

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Record metadata

Created on: 2015-07-29
Curated by:
Lin Liu [2016-03-28]
Lina Ma [2015-12-31]