Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

TRDB

General information

URL: https://tandem.bu.edu/cgi-bin/trdb/trdb.exe
Full name: The Tandem Repeats Database
Description: The Tandem Repeats Database is a public repository of information on tandem repeats in genomic DNA. It contains a variety of tools for repeat analysis, including the Tandem Repeats Finder program, query and filtering capabilities, repeat clustering, polymorphism prediction, PCR primer selection, data visualization and data download in a variety of formats.
Year founded: 2007
Last update: 2014-11-01
Version:
Accessibility:
Unaccessible
Country/Region: United States

Classification & Tag

Data type:
DNA
Data object:
NA
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: Boston University
Address:
City: Boston
Province/State: MA
Country/Region: United States
Contact name (PI/Team): Yevgeniy Gelfand
Contact email (PI/Helpdesk): gbenson@bu.edu

Publications

17175540
TRDB--the Tandem Repeats Database. [PMID: 17175540]
Gelfand Y, Rodriguez A, Benson G.

Tandem repeats in DNA have been under intensive study for many years, first, as a consequence of their usefulness as genomic markers and DNA fingerprints and more recently as their role in human disease and regulatory processes has become apparent. The Tandem Repeats Database (TRDB) is a public repository of information on tandem repeats in genomic DNA. It contains a variety of tools for repeat analysis, including the Tandem Repeats Finder program, query and filtering capabilities, repeat clustering, polymorphism prediction, PCR primer selection, data visualization and data download in a variety of formats. In addition, TRDB serves as a centralized research workbench. It provides user storage space and permits collaborators to privately share their data and analysis. TRDB is available at https://tandem.bu.edu/cgi-bin/trdb/trdb.exe.

Nucleic Acids Res. 2007:35(Database issue) | 132 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
1839/6895 (73.343%)
Gene genome and annotation:
581/2021 (71.301%)
1839
Total Rank
129
Citations
7.167
z-index

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Record metadata

Created on: 2015-08-10
Curated by:
Fatima Batool [2018-09-03]
Lina Ma [2018-06-11]
Zhang Zhang [2016-02-06]