Database Commons

a catalog of biological databases

e.g., animal; RNA; Methylation; China

Database Profile

General information

URL: http://snap.genomics.org.cn/
Full name: Single Nucleotide Polymorphism Annotation Platform
Description: Snap is a server designed to comprehensively analyze single genes and relationships between genes basing on SNPs in the human genome.
Year founded: 2007
Last update: 2007-01-01
Version: v1.0
Accessibility:
Manual:
Accessible
Real time : Checking...
Country/Region: Denmark
Data type:
DNA
Data object:
Database category:
Major organism:
Keywords:
SNP

Contact information

University/Institution: Aarhus University
Address: DK-8000 Aarhus C. Denmark
City: Aarhus
Province/State:
Country/Region: Denmark
Contact name (PI/Team): Jun Wang
Contact email (PI/Helpdesk): wangj@genomics.org.cn

Publications

17135198
Snap: an integrated SNP annotation platform. [PMID: 17135198]
Li S, Ma L, Li H, Vang S, Hu Y, Bolund L, Wang J, Wang J.

Snap (Single Nucleotide Polymorphism Annotation Platform) is a server designed to comprehensively analyze single genes and relationships between genes basing on SNPs in the human genome. The aim of the platform is to facilitate the study of SNP finding and analysis within the framework of medical research. Using a user-friendly web interface, genes can be searched by name, description, position, SNP ID or clone name. Several public databases are integrated, including gene information from Ensembl, protein features from Uniprot/SWISS-PROT, Pfam and DAS-CBS. Gene relationships are fetched from BIND, MINT, KEGG and are integrated with ortholog data from TreeFam to extend the current interaction networks. Integrated tools for primer-design and mis-splicing analysis have been developed to facilitate experimental analysis of individual genes with focus on their variation. Snap is available at http://snap.humgen.au.dk/ and at http://snap.genomics.org.cn/.

Nucleic Acids Res. 2007:35(Database issue) | 24 Citations (from Europe PMC, 2021-06-19)

Ranking

All databases:
2926/5061 (42.205%)
Gene genome and annotation:
858/1350 (36.519%)
2926
Total Rank
24
Citations
1.714
z-index

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Record metadata

Created on: 2015-08-10
Curated by:
Lina Ma [2018-06-14]
Lin Xia [2016-03-28]
Lina Ma [2015-12-31]