Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CeNDR

General information

URL: http://www.elegansvariation.org/
Full name: Caenorhabditis elegans Natural Diversity Resource
Description: CeNDR provides the research community with wild strains, genome-wide sequence and variant data for every strain, and an association mapping portal for studying natural variation in the nematode Caenorhabditis elegans.
Year founded: 2017
Last update: 2018-05-31
Version: v1.3
Accessibility:
Accessible
Country/Region: United States

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Northwestern University
Address: Department of Molecular Biosciences
City: Evanston
Province/State: Illinois
Country/Region: United States
Contact name (PI/Team): Erik C. Andersen
Contact email (PI/Helpdesk): Erik.Andersen@Northwestern.edu

Publications

27701074
CeNDR, the Caenorhabditis elegans natural diversity resource. [PMID: 27701074]
Cook DE, Zdraljevic S, Roberts JP, Andersen EC.

Studies in model organisms have yielded considerable insights into the etiology of disease and our understanding of evolutionary processes. Caenorhabditis elegans is among the most powerful model organisms used to understand biology. However, C. elegans is not used as extensively as other model organisms to investigate how natural variation shapes traits, especially through the use of genome-wide association (GWA) analyses. Here, we introduce a new platform, the C. elegans Natural Diversity Resource (CeNDR) to enable statistical genetics and genomics studies of C. elegans and to connect the results to human disease. CeNDR provides the research community with wild strains, genome-wide sequence and variant data for every strain, and a GWA mapping portal for studying natural variation in C. elegans Additionally, researchers outside of the C. elegans community can benefit from public mappings and integrated tools for comparative analyses. CeNDR uses several databases that are continually updated through the addition of new strains, sequencing data, and association mapping results. The CeNDR data are accessible through a freely available web portal located at http://www.elegansvariation.org or through an application programming interface. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

Nucleic Acids Res. 2017:45(D1) | 256 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
530/6895 (92.328%)
Gene genome and annotation:
186/2021 (90.846%)
530
Total Rank
237
Citations
29.625
z-index

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Record metadata

Created on: 2017-02-17
Curated by:
[2018-12-04]
Lina Ma [2018-07-03]
Shixiang Sun [2017-02-17]