Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

HLA-ADR

General information

URL: http://www.allelefrequencies.net/hla-adr/
Full name: Human leukocyte antigens Adverse Drug Reaction Database
Description: HLA-ADR is part of the Allele Frequencies Net Database (AFND). The main aim of this module is to provide users with an open database listing known adverse drug reactions with HLA alleles.
Year founded: 2016
Last update: 2016-05-17
Version:
Accessibility:
Accessible
Country/Region: United Kingdom

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Institute of Integrative Biology
Address: L7 8XP
City: Liverpool
Province/State:
Country/Region: United Kingdom
Contact name (PI/Team): Andrew R. Jones
Contact email (PI/Helpdesk): andrew.jones@liverpool.ac.uk

Publications

27189608
A web resource for mining HLA associations with adverse drug reactions: HLA-ADR. [PMID: 27189608]
Ghattaoraya GS, Dundar Y, González-Galarza FF, Maia MH, Santos EJ, da Silva AL, McCabe A, Middleton D, Alfirevic A, Dickson R, Jones AR.

Human leukocyte antigens (HLA) are an important family of genes involved in the immune system. Their primary function is to allow the host immune system to be able to distinguish between self and non-self peptides-e.g. derived from invading pathogens. However, these genes have also been implicated in immune-mediated adverse drug reactions (ADRs), presenting a problem to patients, clinicians and pharmaceutical companies. We have previously developed the Allele Frequency Net Database (AFND) that captures the allelic and haplotype frequencies for these HLA genes across many healthy populations from around the world. Here, we report the development and release of the HLA-ADR database that captures data from publications where HLA alleles and haplotypes have been associated with ADRs (e.g. Stevens-Johnson Syndrome/toxic epidermal necrolysis and drug-induced liver injury). HLA-ADR was created by using data obtained through systematic review of the literature and semi-automated literature mining. The database also draws on data already present in AFND allowing users to compare and analyze allele frequencies in both ADR patients and healthy populations. The HLA-ADR database provides clinicians and researchers with a centralized resource from which to investigate immune-mediated ADRs.Database URL: http://www.allelefrequencies.net/hla-adr/. © The Author(s) 2016. Published by Oxford University Press.

Database (Oxford). 2016:2016() | 22 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
3870/6895 (43.887%)
Health and medicine:
974/1738 (44.016%)
3870
Total Rank
20
Citations
2.222
z-index

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Record metadata

Created on: 2017-02-28
Curated by:
Yue Qi [2023-09-14]
Lina Ma [2017-06-05]
Shixiang Sun [2017-02-28]