Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

MouseCyc

General information

URL: http://mousecyc.jax.org
Full name: a curated biochemical pathways database for the laboratory mouse
Description: MouseCyc is a new, manually curated database of both known and predicted metabolic pathways for the laboratory mouse. The database records for 1,060 genes in Mouse Genome Informatics (MGI) are linked directly to 294 pathways, 1,790 enzymatic reactions, and 1,122 compounds in MouseCyc.
Year founded: 2009
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: United States

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Jackson Laboratory
Address:
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): Carol J Bult
Contact email (PI/Helpdesk): Carol.Bult@jax.org

Publications

19682380
MouseCyc: a curated biochemical pathways database for the laboratory mouse. [PMID: 19682380]
Evsikov AV, Dolan ME, Genrich MP, Patek E, Bult CJ.

Linking biochemical genetic data to the reference genome for the laboratory mouse is important for comparative physiology and for developing mouse models of human biology and disease. We describe here a new database of curated metabolic pathways for the laboratory mouse called MouseCyc http://mousecyc.jax.org. MouseCyc has been integrated with genetic and genomic data for the laboratory mouse available from the Mouse Genome Informatics database and with pathway data from other organisms, including human.

Genome Biol. 2009:10(8) | 43 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
3518/6895 (48.992%)
Gene genome and annotation:
1089/2021 (46.165%)
Pathway:
214/451 (52.772%)
Health and medicine:
882/1738 (49.31%)
3518
Total Rank
43
Citations
2.688
z-index

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Record metadata

Created on: 2018-01-27
Curated by:
Pei Liu [2022-08-24]
Zhuang Xiong [2018-02-23]