Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

MycoDB

General information

URL: http://myco.bham.ac.uk
Full name: an online database for comparative genomics of the mycobacteria and related organisms
Description: MycoDB ( http://myco.bham.ac.uk ) is an online resource designed to facilitate genomic analyses of Mycobacterium spp. and related genera. Regions of interest can be found by searching the annotation, BLAST searching against the sequence data, or specifying genomic coordinates.
Year founded: 2009
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: United Kingdom

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: University of Cambridge
Address:
City:
Province/State:
Country/Region: United Kingdom
Contact name (PI/Team): Chaudhuri RR
Contact email (PI/Helpdesk): rrc22@cam.ac.uk

Publications

20560061
MycoDB: an online database for comparative genomics of the mycobacteria and related organisms. [PMID: 20560061]
Chaudhuri RR.

MycoDB ( http://myco.bham.ac.uk ) is an online resource designed to facilitate genomic analyses of Mycobacterium spp. and related genera. Regions of interest can be found by searching the annotation, BLAST searching against the sequence data, or specifying genomic coordinates. Tools are provided to access the primary sequence data and annotation, design primers, and view the equivalent region in other genomes, as determined using MUMmer. The whole chromosome can also be displayed and genes "painted" using data such as their GC content. The site also acts as a portal, allowing the user to access other relevant online resources.

Methods Mol Biol. 2009:465() | 2 Citations (from Europe PMC, 2026-04-04)

Ranking

All databases:
6805/6932 (1.847%)
Gene genome and annotation:
2005/2039 (1.717%)
6805
Total Rank
2
Citations
0.118
z-index

Community reviews

Not Rated
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Record metadata

Created on: 2018-01-27
Curated by:
Zhuang Xiong [2018-03-28]
Zhuang Xiong [2018-02-23]