Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

eProS

General information

URL: http://bioservices.hs-mittweida.de/Epros/
Full name: Energy Profile Suite
Description: eProS is a database and toolbox for calculation, analysis, comparison and prediction of protein energy profiles.
Year founded: 2013
Last update: NA
Version: v1.0
Accessibility:
Accessible
Country/Region: Germany

Classification & Tag

Data type:
Data object:
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Contact information

University/Institution: University of Applied Sciences Mittweida
Address: Department of Mathematics,Natural and Computer Sciences,University of Applied Sciences Mittweida,Mittweida,Saxony,Technikumplatz 17,D-09648,Germany
City: Technikumplatz
Province/State:
Country/Region: Germany
Contact name (PI/Team): Florian Heinke
Contact email (PI/Helpdesk): florian.heinke@hs-mittweida.de

Publications

23161695
eProS--a database and toolbox for investigating protein sequence-structure-function relationships through energy profiles. [PMID: 23161695]
Heinke F, Schildbach S, Stockmann D, Labudde D.

Gaining information about structural and functional features of newly identified proteins is often a difficult task. This information is crucial for understanding sequence-structure-function relationships of target proteins and, thus, essential in comprehending the mechanisms and dynamics of the molecular systems of interest. Using protein energy profiles is a novel approach that can contribute in addressing such problems. An energy profile corresponds to the sequence of energy values that are derived from a coarse-grained energy model. Energy profiles can be computed from protein structures or predicted from sequences. As shown, correspondences and dissimilarities in energy profiles can be applied for investigations of protein mechanics and dynamics. We developed eProS (energy profile suite, freely available at http://bioservices.hs-mittweida.de/Epros/), a database that provides ?76?000 pre-calculated energy profiles as well as a toolbox for addressing numerous problems of structure biology. Energy profiles can be browsed, visualized, calculated from an uploaded structure or predicted from sequence. Furthermore, it is possible to align energy profiles of interest or compare them with all entries in the eProS database to identify significantly similar energy profiles and, thus, possibly relevant structural and functional relationships. Additionally, annotations and cross-links from numerous sources provide a broad view of potential biological correspondences.

Nucleic Acids Res. 2013:41(Database issue) | 3 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
6543/6895 (5.12%)
Structure:
921/967 (4.86%)
6543
Total Rank
3
Citations
0.25
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Record metadata

Created on: 2015-06-20
Curated by:
Jian Sang [2016-04-05]
Jian Sang [2015-12-11]
Jian Sang [2015-06-28]
Jian Sang [2015-06-27]