Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

BIOGEN BASE - CASSAVA

General information

URL: http://www.tnaugenomics.com/biogenbase/casava
Full name:
Description: Database (BIOGEN BASE - CASSAVA) is designed using PHP and MySQL and is equipped with extensive search options. It is more user-friendly and made publicly available, to improve the research and development of cassava by making a wealth of genetics and genomics data available through open, common, and worldwide forum for all individuals interested in the field.
Year founded: 2011
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: India

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Tamil Nadu Agricultural University
Address: Genomics and Proteomics Laboratory, Department of Plant Molecular Biology and Biotechnology, Centre for Plant Molecular Biology, Tamil Nadu Agricultural University, Coimbatore - 641 003
City: Coimbatore
Province/State:
Country/Region: India
Contact name (PI/Team): Senthil Natesan
Contact email (PI/Helpdesk): senthil.natesan@tnau.ac.cn

Publications

21904428
A web accessible resource for investigating cassava phenomics and genomics information: BIOGEN BASE. [PMID: 21904428]
Jayakodi M, Selvan SG, Natesan S, Muthurajan R, Duraisamy R, Ramineni JJ, Rathinasamy SA, Karuppusamy N, Lakshmanan P, Chokkappan M.

The goal of our research is to establish a unique portal to bring out the potential outcome of the research in the Casssava crop. The Biogen base for cassava clearly brings out the variations of different traits of the germplasms, maintained at the Tapioca and Castor Research Station, Tamil Nadu Agricultural University. Phenotypic and genotypic variations of the accessions are clearly depicted, for the users to browse and interpret the variations using the microsatellite markers. Database (BIOGEN BASE - CASSAVA) is designed using PHP and MySQL and is equipped with extensive search options. It is more user-friendly and made publicly available, to improve the research and development of cassava by making a wealth of genetics and genomics data available through open, common, and worldwide forum for all individuals interested in the field.
AVAILABILITY: The database is available for free at http://www.tnaugenomics.com/biogenbase/casava.php.

Bioinformation. 2011:6(10) | 3 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
6609/6895 (4.162%)
Raw bio-data:
538/582 (7.732%)
6609
Total Rank
3
Citations
0.214
z-index

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Record metadata

Created on: 2018-01-27
Curated by:
Meiye Jiang [2018-02-25]