Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

G2P Knowledge Centre

General information

URL: http://www.gen2phen.org
Full name: genotype-to-phenotype Knowledge Centre
Description: This central platform provides holistic searching of the G2P data domain allied with facilities for data annotation and user feedback, access to extensive G2P and informatics resources, and tools for constructing online working communities centered on the G2P domain.
Year founded: 2011
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: United Kingdom

Contact information

University/Institution: University of Leicester
Address: Department of Genetics, University of Leicester, University Road, Leicester, United Kingdom.
City: Leicester
Province/State:
Country/Region: United Kingdom
Contact name (PI/Team): Webb AJ
Contact email (PI/Helpdesk): ajw51@leicester.ac.uk

Publications

21438073
An informatics project and online "Knowledge Centre" supporting modern genotype-to-phenotype research. [PMID: 21438073]
Webb AJ, Thorisson GA, Brookes AJ, GEN2PHEN Consortium.

Explosive growth in the generation of genotype-to-phenotype (G2P) data necessitates a concerted effort to tackle the logistical and informatics challenges this presents. The GEN2PHEN Project represents one such effort, with a broad strategy of uniting disparate G2P resources into a hybrid centralized-federated network. This is achieved through a holistic strategy focussed on three overlapping areas: data input standards and pipelines through which to submit and collect data (data in); federated, independent, extendable, yet interoperable database platforms on which to store and curate widely diverse datasets (data storage); and data formats and mechanisms with which to exchange, combine, and extract data (data exchange and output). To fully leverage this data network, we have constructed the "G2P Knowledge Centre" (http://www.gen2phen.org). This central platform provides holistic searching of the G2P data domain allied with facilities for data annotation and user feedback, access to extensive G2P and informatics resources, and tools for constructing online working communities centered on the G2P domain. Through the efforts of GEN2PHEN, and through combining data with broader community-derived knowledge, the Knowledge Centre opens up exciting possibilities for organizing, integrating, sharing, and interpreting new waves of G2P data in a collaborative fashion.

Hum Mutat. 2011:32(5) | 24 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
4470/6895 (35.185%)
Genotype phenotype and variation:
644/1005 (36.02%)
Metadata:
461/719 (36.022%)
4470
Total Rank
23
Citations
1.643
z-index

Community reviews

Not Rated
Data quality & quantity:
Content organization & presentation
System accessibility & reliability:

Word cloud

Related Databases

Citing
Cited by

Record metadata

Created on: 2018-01-27
Curated by:
Meiye Jiang [2018-02-25]