Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CCG

General information

URL: http://ccg.xingene.net
Full name: catalogue of cancer genes
Description: CCG, Catalogue of Cancer Genes/lncRNAs, is a manually curated database providing both known and candidate cancer protein-coding genes and lncRNAs. With the help of CCG, users can easily access to a comprehensive list of cancer genes as well as genomic aberration related with these genes.
Year founded: 2016
Last update: 2016
Version: v1.0
Accessibility:
Unaccessible
Country/Region: China

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Tsinghua University
Address: MOE Key Laboratory of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing, 100084, China
City: Beijing
Province/State: Beijing
Country/Region: China
Contact name (PI/Team): Zhi John Lu
Contact email (PI/Helpdesk): lulab@biomed.tsinghua.edu.cn

Publications

28147217
CCG: an integrative resource of cancer protein-coding genes and long noncoding RNAs. [PMID: 28147217]
Liu M, Yang YT, Xu G, Tan C, Lu ZJ.

The identification of cancer genes remains a main aim of cancer research. With the advances of high-throughput sequencing technologies, thousands of novel cancer genes were identified through recurrent mutation analyses and differential expression analyses between normal tissues and tumors in large populations. Many databases were developed to document the cancer genes. However, no public database providing both cancer protein-coding genes and cancer lncRNAs is available presently. Here, we present the Catalogue of Cancer Genes (CCG) database (http://ccg.xingene.net), a catalogue of cancer genes. It includes both well-supported and candidate cancer protein-coding genes and cancer lncRNAs collected from literature search and public databases. In addition, uniform genomic aberration information (such as somatic mutation and copy number variation) and drug-gene interactions were assigned to cancer genes in the database. CCG represents an effort on integrative assembly of well-supported and candidate cancer protein-coding and long noncoding RNA genes and takes advantages of high-throughput sequencing results on large populations. With the help of CCG, users can easily access a comprehensive list of cancer genes as well as genomic aberration related with these genes. The availability of integrative information will facilitate the understanding of cancer mechanisms. In addition, drug-gene information in CCG provides a useful guide to the development of new anti-cancer drugs and selection of rational combination therapies.

Discov Med. 2016:22(123) | 6 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
5809/6895 (15.765%)
Gene genome and annotation:
1747/2021 (13.607%)
Health and medicine:
1473/1738 (15.305%)
5809
Total Rank
6
Citations
0.667
z-index

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Record metadata

Created on: 2018-01-27
Curated by:
Lina Ma [2023-04-04]
Farah Nazir [2018-04-06]