Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

EUROCarbDB

General information

URL: http://www.ebi.ac.uk/eurocarb
Full name:
Description: EUROCarbDB is a relational database containing glycan structures, their biological context and, when available, primary and interpreted analytical data from high-performance liquid chromatography, mass spectrometry and nuclear magnetic resonance experiments.
Year founded: 2011
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: Germany

Classification & Tag

Data type:
Data object:
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: German Cancer Research Center
Address: Core Facility, Molecular Structure Analysis, German Cancer Research Center, Heidelberg, Germany
City: Heidelberg
Province/State:
Country/Region: Germany
Contact name (PI/Team): Stuart M Haslam
Contact email (PI/Helpdesk): s.haslam@imperial.ac.uk

Publications

21106561
EUROCarbDB: An open-access platform for glycoinformatics. [PMID: 21106561]
von der Lieth CW, Freire AA, Blank D, Campbell MP, Ceroni A, Damerell DR, Dell A, Dwek RA, Ernst B, Fogh R, Frank M, Geyer H, Geyer R, Harrison MJ, Henrick K, Herget S, Hull WE, Ionides J, Joshi HJ, Kamerling JP, Leeflang BR, Lütteke T, Lundborg M, Maass K, Merry A, Ranzinger R, Rosen J, Royle L, Rudd PM, Schloissnig S, Stenutz R, Vranken WF, Widmalm G, Haslam SM.

The EUROCarbDB project is a design study for a technical framework, which provides sophisticated, freely accessible, open-source informatics tools and databases to support glycobiology and glycomic research. EUROCarbDB is a relational database containing glycan structures, their biological context and, when available, primary and interpreted analytical data from high-performance liquid chromatography, mass spectrometry and nuclear magnetic resonance experiments. Database content can be accessed via a web-based user interface. The database is complemented by a suite of glycoinformatics tools, specifically designed to assist the elucidation and submission of glycan structure and experimental data when used in conjunction with contemporary carbohydrate research workflows. All software tools and source code are licensed under the terms of the Lesser General Public License, and publicly contributed structures and data are freely accessible. The public test version of the web interface to the EUROCarbDB can be found at http://www.ebi.ac.uk/eurocarb.

Glycobiology. 2011:21(4) | 83 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
2236/6895 (67.585%)
Raw bio-data:
153/582 (73.883%)
Structure:
313/967 (67.735%)
2236
Total Rank
77
Citations
5.5
z-index

Community reviews

Not Rated
Data quality & quantity:
Content organization & presentation
System accessibility & reliability:

Word cloud

Related Databases

Citing
Cited by

Record metadata

Created on: 2018-01-28
Curated by:
Lin Liu [2022-08-03]
Meiye Jiang [2018-02-26]