Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

TRABAS

General information

URL: http://www.bioinformatics.org/trabas
Full name:
Description: We have assembled and analyzed data from available expression studies related to ABA signaling in Arabidopsis along with other available microarray data, functional annotations and information related to occurrence of cis-regulatory elements in promoters of Arabidopsis genes in a database called TRABAS.
Year founded: 2008
Last update:
Version:
Accessibility:
Accessible
Country/Region: India

Classification & Tag

Data type:
RNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: University of Calcutta
Address:
City:
Province/State:
Country/Region: India
Contact name (PI/Team): Choudhury A
Contact email (PI/Helpdesk): ananyo.c@gmail.com

Publications

19374134
TRABAS: a database for transcription regulation by ABA signaling. [PMID: 19374134]
Choudhury A, Lahiri A.

The effects of abscisic acid (ABA) induction on Arabidopsis thaliana transcriptome have been investigated by various expression studies. We have assembled and analyzed data from available expression studies related to ABA signaling in Arabidopsis along with other available microarray data, functional annotations and information related to occurrence of cis-regulatory elements in promoters of Arabidopsis genes in a database called TRABAS. TRABAS is expected to provide a simple, user-friendly platform to facilitate the study of different aspects of ABA mediated transcription regulation and is freely available at http://www.bioinformatics.org/trabas/.

In Silico Biol. 2008:8(5-6) | 3 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
6684/6895 (3.075%)
Expression:
1307/1347 (3.044%)
Interaction:
1174/1194 (1.759%)
6684
Total Rank
3
Citations
0.176
z-index

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Record metadata

Created on: 2018-01-27
Curated by:
Mengyu Pan [2018-09-21]
Mengyu Pan [2018-02-23]
Pei Wang [2018-01-27]