Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

BGD

General information

URL: http://donglab.ecnu.edu.cn/databases/BatGenome
Full name: A Database of Bat Genomes
Description: BGD is the first database of bat genomes. The BGD enables use of genomic data toward facilitating further understanding of the fundamental biology of bat species, and the adaptation of specialized traits. It uses several common gateway interface scripts to process user’s input to search the database. It is the first repository centralizing the genomes and genes of bat species. The database not only provides a large resource for the bat researches, but also supplies a platform for comparative genomic analysis.
Year founded: 2015
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: China

Contact information

University/Institution: East China Normal University
Address: Institute of Molecular Ecology and Evolution, SKLEC & IECR, East China Normal University, Shanghai, China
City: Shanghai
Province/State: Shanghai
Country/Region: China
Contact name (PI/Team): Dong Dong
Contact email (PI/Helpdesk): ddong.ecnu@gmail.com

Publications

26110276
BGD: a database of bat genomes. [PMID: 26110276]
Fang J, Wang X, Mu S, Zhang S, Dong D.

Bats account for ~20% of mammalian species, and are the only mammals with true powered flight. For the sake of their specialized phenotypic traits, many researches have been devoted to examine the evolution of bats. Until now, some whole genome sequences of bats have been assembled and annotated, however, a uniform resource for the annotated bat genomes is still unavailable. To make the extensive data associated with the bat genomes accessible to the general biological communities, we established a Bat Genome Database (BGD). BGD is an open-access, web-available portal that integrates available data of bat genomes and genes. It hosts data from six bat species, including two megabats and four microbats. Users can query the gene annotations using efficient searching engine, and it offers browsable tracks of bat genomes. Furthermore, an easy-to-use phylogenetic analysis tool was also provided to facilitate online phylogeny study of genes. To the best of our knowledge, BGD is the first database of bat genomes. It will extend our understanding of the bat evolution and be advantageous to the bat sequences analysis. BGD is freely available at: http://donglab.ecnu.edu.cn/databases/BatGenome/.

PLoS One. 2015:10(6) | 3 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
1542/6895 (77.65%)
Gene genome and annotation:
506/2021 (75.012%)
Phylogeny and homology:
283/302 (6.623%)
Metadata:
664/719 (7.789%)
1542
Total Rank
3
Citations
0.3
z-index

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Record metadata

Created on: 2018-01-27
Curated by:
Dong Zou [2018-04-16]
Sidra Younas [2018-04-12]
Sidra Younas [2018-04-09]
Sidra Younas [2018-04-08]
Meiye Jiang [2018-01-27]