| URL: | http://www.dbtbrucellosis.in/brucellabase.html |
| Full name: | BrucellaBase: Genome Information Resource |
| Description: | BrucellaBase, a web-based platform, providing features of a genome database together with unique analysis tools. BrucellaBase currently contains genome data of 685 Brucella strains along with the user interfaces for BLAST, VFDB, CARD, pairwise genome alignment, MLST and cgMLST typing. Availability of these tools will enable the researchers interested in Brucella to get meaningful information from Brucella genome sequences. BrucellaBase will regularly be updated with new genome sequences, new features along with improvements in genome annotations. |
| Year founded: | 2016 |
| Last update: | 2018 |
| Version: | |
| Accessibility: |
Accessible
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| Country/Region: | India |
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| University/Institution: | Madurai Kamaraj University |
| Address: | Department of Genetics, School of Biological Sciences, Madurai Kamaraj University, Madurai - 625021, Tamil Nadu, India. |
| City: | Madurai |
| Province/State: | Tamil Nadu |
| Country/Region: | India |
| Contact name (PI/Team): | Jeyaprakash Rajendhran |
| Contact email (PI/Helpdesk): | jrajendhran@gmail.com |
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BrucellaBase: Genome information resource. [PMID: 27164438]
Brucella sp. causes a major zoonotic disease, brucellosis. Brucella belongs to the family Brucellaceae under the order Rhizobiales of Alphaproteobacteria. We present BrucellaBase, a web-based platform, providing features of a genome database together with unique analysis tools. We have developed a web version of the multilocus sequence typing (MLST) (Whatmore et al., 2007) and phylogenetic analysis of Brucella spp. BrucellaBase currently contains genome data of 510 Brucella strains along with the user interfaces for BLAST, VFDB, CARD, pairwise genome alignment and MLST typing. Availability of these tools will enable the researchers interested in Brucella to get meaningful information from Brucella genome sequences. BrucellaBase will regularly be updated with new genome sequences, new features along with improvements in genome annotations. BrucellaBase is available online at http://www.dbtbrucellosis.in/brucellabase.html or http://59.99.226.203/brucellabase/homepage.html. |