Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CGMD

General information

URL: http://cgmd.in
Full name: Cancer Gene Marker Database
Description: The Cancer Gene Marker Database (CGMD), integrates data on tumor genes and markers based on experimental evidence. CGMD provides complete cancer annotations and molecular descriptions of cancer genes and markers such as CpG islands, promoters, exons, PDB structures, active sites and domains. The major goal of the present database is to collect, integrate and maintain a high quality cancer gene marker database (CGMD), which serves as a comprehensive, fully categorized and accurately annotated gene markers of cancer. The database provides a good platform for cross-references and querying interfaces.
Year founded: 2015
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: India

Contact information

University/Institution: Sri Venkateswara University
Address: Division of Animal Biotechnology, Department of Zoology, Sri Venkateswara University, Tirupati-517502, Andhra Pradesh, India
City:
Province/State: Andhra Pradesh
Country/Region: India
Contact name (PI/Team): Matcha Bhaskar
Contact email (PI/Helpdesk): moc.liamg@0102raksahbahctam

Publications

26160459
CGMD: An integrated database of cancer genes and markers. [PMID: 26160459]
Pradeepkiran JA, Sainath SB, Kumar KK, Balasubramanyam L, Prabhakar KV, Bhaskar M.

Integrating cancer genes and markers with experimental evidence might provide valuable information for the further investigation of crosstalk between tumor genes and markers in cancer biology. To achieve this objective, we developed a database known as the Cancer Gene Marker Database (CGMD), which integrates data on tumor genes and markers based on experimental evidence. The major goal of CGMD is to provide the following: 1) current systematic treatment approaches and recent advances in different cancer treatments; 2) the aggregation of different genes and markers by their molecular characteristics and pathway associations; and 3) free access to the data compiled by CGMD at http://cgmd.in/. The database consists of 309 genes and 206 markers, as well as a list of 40 different human cancers, with detailed descriptions of all characterized markers. CGMD provides complete cancer annotations and molecular descriptions of cancer genes and markers such as CpG islands, promoters, exons, PDB structures, active sites and domains.

Sci Rep. 2015:5() | 4 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
6289/6895 (8.803%)
Gene genome and annotation:
1878/2021 (7.125%)
Structure:
881/967 (8.997%)
Pathway:
412/451 (8.869%)
Literature:
528/577 (8.666%)
Metadata:
640/719 (11.127%)
6289
Total Rank
4
Citations
0.4
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Record metadata

Created on: 2018-01-27
Curated by:
Sidra Younas [2018-04-13]
Sidra Younas [2018-04-09]
Meiye Jiang [2018-01-27]