Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

MSGene

General information

URL: http://MSGene.bioinfo-minzhao.org
Full name: Metastasis Suppressor Gene Database
Description: MSGene is constructed as a free database and analysis server to enable users to rapidly search and retrieve summarized MS genes. The comprehensive functional enrichment analyses reveal that multiple signal events, which involved in epithelium/tissue morphogenesis and epithelia cell proliferation, are related to MS genes.
Year founded: 2015
Last update:
Version:
Accessibility:
Accessible
Country/Region: China

Contact information

University/Institution: Peking University
Address: Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing 100871, P.R. China.
City: Beijing
Province/State: Beijing
Country/Region: China
Contact name (PI/Team): Hong Qu
Contact email (PI/Helpdesk): quh@mail.cbi.pku.edu.cn

Publications

26486520
An evidence-based knowledgebase of metastasis suppressors to identify key pathways relevant to cancer metastasis. [PMID: 26486520]
Zhao M, Li Z, Qu H.

Metastasis suppressor genes (MS genes) are genes that play important roles in inhibiting the process of cancer metastasis without preventing growth of the primary tumor. Identification of these genes and understanding their functions are critical for investigation of cancer metastasis. Recent studies on cancer metastasis have identified many new susceptibility MS genes. However, the comprehensive illustration of diverse cellular processes regulated by metastasis suppressors during the metastasis cascade is lacking. Thus, the relationship between MS genes and cancer risk is still unclear. To unveil the cellular complexity of MS genes, we have constructed MSGene (http://MSGene.bioinfo-minzhao.org/), the first literature-based gene resource for exploring human MS genes. In total, we manually curated 194 experimentally verified MS genes and mapped to 1448 homologous genes from 17 model species. Follow-up functional analyses associated 194 human MS genes with epithelium/tissue morphogenesis and epithelia cell proliferation. In addition, pathway analysis highlights the prominent role of MS genes in activation of platelets and coagulation system in tumor metastatic cascade. Moreover, global mutation pattern of MS genes across multiple cancers may reveal common cancer metastasis mechanisms. All these results illustrate the importance of MSGene to our understanding on cell development and cancer metastasis.

Sci Rep. 2015:5() | 18 Citations (from Europe PMC, 2026-03-28)

Ranking

All databases:
4291/6932 (38.113%)
Gene genome and annotation:
1306/2039 (35.998%)
Genotype phenotype and variation:
618/1012 (39.032%)
Expression:
889/1361 (34.754%)
Modification:
254/338 (25.148%)
Interaction:
795/1200 (33.833%)
Pathway:
274/454 (39.868%)
Health and medicine:
1079/1755 (38.575%)
Literature:
367/577 (36.568%)
Metadata:
438/723 (39.557%)
4291
Total Rank
18
Citations
1.636
z-index

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Record metadata

Created on: 2018-01-27
Curated by:
Sidra Younas [2018-04-10]
Meiye Jiang [2018-01-27]