Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

miRandola

General information

URL: http://mirandola.iit.cnr.it
Full name: miRandola
Description: miRandola is a database of extracellular non-coding RNAs (ncRNAs) that was initially published in 2012, foreseeing the relevance of ncRNAs as non-invasive biomarkers. An increasing amount of experimental evidence shows that ncRNAs are frequently dysregulated in diseases. Further, ncRNAs have been discovered in different extracellular forms, such as exosomes, which circulate in human body fluid
Year founded: 2018
Last update: 2017
Version: 1.0
Accessibility:
Manual:
Accessible
Country/Region: Denmark

Classification & Tag

Data type:
RNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: University of Copenhagen
Address: Disease Systems Biology, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark
City:
Province/State:
Country/Region: Denmark
Contact name (PI/Team): francessco russo
Contact email (PI/Helpdesk): kd.uk.rpc@ossur.ocsecnarf

Publications

29036351
miRandola 2017: a curated knowledge base of non-invasive biomarkers. [PMID: 29036351]
Russo F, Di Bella S, Vannini F, Berti G, Scoyni F, Cook HV, Santos A, Nigita G, Bonnici V, Laganà A, Geraci F, Pulvirenti A, Giugno R, De Masi F, Belling K, Jensen LJ, Brunak S, Pellegrini M, Ferro A.

miRandola (http://mirandola.iit.cnr.it/) is a database of extracellular non-coding RNAs (ncRNAs) that was initially published in 2012, foreseeing the relevance of ncRNAs as non-invasive biomarkers. An increasing amount of experimental evidence shows that ncRNAs are frequently dysregulated in diseases. Further, ncRNAs have been discovered in different extracellular forms, such as exosomes, which circulate in human body fluids. Thus, miRandola 2017 is an effort to update and collect the accumulating information on extracellular ncRNAs that is spread across scientific publications and different databases. Data are manually curated from 314 articles that describe miRNAs, long non-coding RNAs and circular RNAs. Fourteen organisms are now included in the database, and associations of ncRNAs with 25 drugs, 47 sample types and 197 diseases. miRandola also classifies extracellular RNAs based on their extracellular form: Argonaute2 protein, exosome, microvesicle, microparticle, membrane vesicle, high density lipoprotein and circulating. We also implemented a new web interface to improve the user experience.

Nucleic Acids Res. 2018:46(D1) | 47 Citations (from Europe PMC, 2024-12-28)

Ranking

All databases:
1211/6267 (80.693%)
Expression:
229/1210 (81.157%)
Structure:
170/871 (80.597%)
Interaction:
261/1052 (75.285%)
1211
Total Rank
43
Citations
7.167
z-index

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Not Rated
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Record metadata

Created on: 2018-01-28
Curated by:
huma shireen [2018-04-10]
Yang Zhang [2018-01-28]