Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

ExtremeDB

General information

URL: http://extrem.igib.res.in
Full name:
Description: a unified web repository of extremophilic archaea and bacteria
Year founded: 2013
Last update:
Version:
Accessibility:
Accessible
Country/Region: India

Classification & Tag

Data type:
Data object:
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: Institute of Genomics and Integrative Biology
Address:
City:
Province/State:
Country/Region: India
Contact name (PI/Team): Rita Kumar
Contact email (PI/Helpdesk): rita@igib.res.in

Publications

23696792
ExtremeDB: a unified web repository of extremophilic archaea and bacteria. [PMID: 23696792]
Majhi MC, Behera AK, Kulshreshtha NM, Mahmooduzafar, Kumar R, Kumar A.

Extremophiles are the microorganisms which can survive under extreme conditions of temperature, pressure, pH, salinity etc. They have gained much attention for their potential role in biotechnological and industrial applications. The large amount of experimental data in the literature is so diverse, that it becomes difficult and time consuming for the researcher to implement it in various areas of research. Therefore, a systematic arrangement of data and redirection in a similar fashion through web interface can assist researchers in analyzing the data as per their requirement. ExtremeDB is a freely available web based relational database which integrates general characteristics, genome-proteome information, industrial applications and recent scientific investigations of the seven major groups of 865 extremophillic microorganisms. The search options are user friendly and analyses tools such as Compare and Extreme BLAST have been incorporated for comparative analysis of two or more extremophiles and determining the sequence similarity of a given protein/nucleotide in relation to other extremophiles respectively. The effort put forth herein in the form of database, would open up new avenues on the potential utility of extremophiles in applied research. ExtremeDB is freely accessible via http://extrem.igib.res.in.

PLoS One. 2013:8(5) | 7 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
6089/6895 (11.704%)
Raw bio-data:
493/582 (15.464%)
Gene genome and annotation:
1824/2021 (9.797%)
6089
Total Rank
6
Citations
0.5
z-index

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Not Rated
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Record metadata

Created on: 2018-01-28
Curated by:
Zhuang Xiong [2018-02-25]
Pei Wang [2018-01-28]