Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

TGED

General information

URL: http://tged.ihb.ac.cn
Full name: Tetrahymena Gene Expression Database
Description: TGED is the first expression database of a ciliated protozoan. It covers three major physiological and developmental states: growth, starvation, and conjugation, and can be accessed through a user-friendly web interface.
Year founded: 2011
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: China

Classification & Tag

Data type:
RNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Institute of Hydrobiology, Chinese Academy of Sciences
Address: Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China
City: Wuhan
Province/State: Hubei
Country/Region: China
Contact name (PI/Team): Wei Miao
Contact email (PI/Helpdesk): miaowei@ihb.ac.cn

Publications

21253873
Tetrahymena Gene Expression Database (TGED): a resource of microarray data and co-expression analyses for Tetrahymena. [PMID: 21253873]
Xiong J, Lu X, Lu Y, Zeng H, Yuan D, Feng L, Chang Y, Bowen J, Gorovsky M, Fu C, Miao W.

Tetrahymena thermophila is a model eukaryotic organism. Functional genomic analyses in Tetrahymena present rich opportunities to address fundamental questions of cell and molecular biology. The Tetrahymena Gene Expression Database (TGED; available at http://tged.ihb.ac.cn) is the first expression database of a ciliated protozoan. It covers three major physiological and developmental states: growth, starvation, and conjugation, and can be accessed through a user-friendly web interface. The gene expression profiles and candidate co-expressed genes for each gene can be retrieved using Gene ID or Gene description searches. Descriptions of standardized methods of sample preparation and the opportunity to add new Tetrahymena microarray data will be of great interest to the Tetrahymena research community. TGED is intended to be a resource for all members of the scientific research community who are interested in Tetrahymena and other ciliates.

Sci China Life Sci. 2011:54(1) | 34 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
3878/6895 (43.771%)
Expression:
801/1347 (40.609%)
3878
Total Rank
31
Citations
2.214
z-index

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Record metadata

Created on: 2018-01-28
Curated by:
Lina Ma [2019-11-30]
Meiye Jiang [2018-02-26]