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Database Commons

a catalog of worldwide biological databases

Database Profile

NABIC marker database

General information

URL: http://nabic.rda.go.kr/gere/rice/molecularMarkers
Full name: A molecular markers information network of agricultural crops
Description: The web-based marker database consists of three major functional categories: map viewer, RSN marker and gene annotation. It provides 7250 marker locations, 3301 RSN marker property, 3280 molecular marker annotation information in agricultural plants. The individual molecular marker provides information such as marker name, expressed sequence tag number, gene definition and general marker information.
Year founded: 2013
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: Korea, Republic of

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: National Academy of Agricultural Science
Address: Genomics Division, National Academy of Agricultural Science (NAAS), Suwon 441-707, Korea
City:
Province/State:
Country/Region: Korea, Republic of
Contact name (PI/Team): Dong-Suk Park
Contact email (PI/Helpdesk): dspark@rda.go.kr

Publications

26527854
Molecular marker database for efficient use in agricultural breeding programs. [PMID: 26527854]
Kim CK, Lee GS, Mo JS, Bae SH, Lee TH.

The National Agricultural Biotechnology Information Center (NABIC) constructed a web-based molecular marker database to provide information about 7,847 sequence-tagged site (STS) markers identified in the 11 species using a next generation sequencing (NGS) technologies. The database consists of three major functional categories: keyword search, detailed viewer and download function. The molecular marker annotation table provides detailed information such as ownership information, basic information, and STS-related characterization information.
AVAILABILITY: The database is available for free at http://nabic.rda.go.kr/Molecularmarker.

Bioinformation. 2015:11(9) | 2 Citations (from Europe PMC, 2025-12-13)
24250118
NABIC marker database: A molecular markers information network of agricultural crops. [PMID: 24250118]
Kim CK, Seol YJ, Lee DJ, Jeong IS, Yoon UH, Lee GS, Hahn JH, Park DS.

In 2013, National Agricultural Biotechnology Information Center (NABIC) reconstructs a molecular marker database for useful genetic resources. The web-based marker database consists of three major functional categories: map viewer, RSN marker and gene annotation. It provides 7250 marker locations, 3301 RSN marker property, 3280 molecular marker annotation information in agricultural plants. The individual molecular marker provides information such as marker name, expressed sequence tag number, gene definition and general marker information. This updated marker-based database provides useful information through a user-friendly web interface that assisted in tracing any new structures of the chromosomes and gene positional functions using specific molecular markers.
AVAILABILITY: The database is available for free at http://nabic.rda.go.kr/gere/rice/molecularMarkers/

Bioinformation. 2013:9(17) | 1 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
6560/6895 (4.873%)
Gene genome and annotation:
1945/2021 (3.81%)
6560
Total Rank
3
Citations
0.25
z-index

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Record metadata

Created on: 2018-01-28
Curated by:
huma shireen [2018-08-27]
Lina Ma [2018-04-23]
Zhuang Xiong [2018-04-23]
Zhuang Xiong [2018-02-25]
Pei Wang [2018-01-28]