| URL: | http://www.conoserver.org/ |
| Full name: | Database for Conopeptides |
| Description: | ConoServer is a database specializing in the sequences and structures of conopeptides,which are toxins expressed by marine cone snails. |
| Year founded: | 2008 |
| Last update: | 6/1/2015 |
| Version: | v1.0 |
| Accessibility: |
Accessible
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| Country/Region: | Australia |
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| University/Institution: | University of Queensland |
| Address: | Brisbane, Queensland 4072, Australia |
| City: | Brisbane |
| Province/State: | Queensland |
| Country/Region: | Australia |
| Contact name (PI/Team): | David J. Craik |
| Contact email (PI/Helpdesk): | d.craik@imb.uq.edu.au |
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ConoServer: updated content, knowledge, and discovery tools in the conopeptide database. [PMID: 22058133]
ConoServer (http://www.conoserver.org) is a database specializing in the sequences and structures of conopeptides, which are toxins expressed by marine cone snails. Cone snails are carnivorous gastropods, which hunt their prey using a cocktail of toxins that potently subvert nervous system function. The ability of these toxins to specifically target receptors, channels and transporters of the nervous system has attracted considerable interest for their use in physiological research and as drug leads. Since the founding publication on ConoServer in 2008, the number of entries in the database has nearly doubled, the interface has been redesigned and new annotations have been added, including a more detailed description of cone snail species, biological activity measurements and information regarding the identification of each sequence. Automatically updated statistics on classification schemes, three-dimensional structures, conopeptide-bearing species and endoplasmic reticulum signal sequence conservation trends, provide a convenient overview of current knowledge on conopeptides. Transcriptomics and proteomics have began generating massive numbers of new conopeptide sequences, and two dedicated tools have been recently implemented in ConoServer to standardize the analysis of conopeptide precursor sequences and to help in the identification by mass spectrometry of toxins whose sequences were predicted at the nucleic acid level. |
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ConoServer, a database for conopeptide sequences and structures. [PMID: 18065428]
ConoServer is a new database dedicated to conopeptides, a large family of peptides found in the venom of marine snails of the genus Conus. These peptides have an exceptional diversity of sequences and chemical modifications and their ability to block ion channels makes them important as drug leads and tools for physiological studies. ConoServer uses standardized names and a genetic and structural classification scheme to present data retrieved from SwissProt, GenBank, the Protein DataBank and the literature. The ConoServer web site incorporates specialized features like the graphic display of post-translational modifications that are extensively present in conopeptides. Currently, ConoServer manages 1214 nucleic sequences (from 54 Conus species), 2258 proteic sequences (from 66 Conus species) and 99 3D structures. http://research1t.imb.uq.edu.au/conoserver/. |