Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

Myosinome

General information

URL: http://caps.ncbs.res.in/myosinome
Full name: a database of myosins from select eukaryotic genomes to facilitate analysis of sequence-structure-function relationships
Description: Myosinome database provides information on sequence, structure and function of myosin classes II, V and VI from five different organisms.
Year founded: 2012
Last update:
Version:
Accessibility:
Accessible
Country/Region: India

Classification & Tag

Data type:
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Major species:
Keywords:

Contact information

University/Institution: National Centre for Biological Sciences
Address:
City: Bangalore
Province/State:
Country/Region: India
Contact name (PI/Team): R. Sowdhamini
Contact email (PI/Helpdesk): mini@ncbs.res.in

Publications

23189029
Myosinome: a database of myosins from select eukaryotic genomes to facilitate analysis of sequence-structure-function relationships. [PMID: 23189029]
Syamaladevi DP, Sunitha MS, Kalaimathy S, Reddy CC, Iftekhar M, Pasha SN, Sowdhamini R.

Myosins are one of the largest protein superfamilies with 24 classes. They have conserved structural features and catalytic domains yet show huge variation at different domains resulting in a variety of functions. Myosins are molecules driving various kinds of cellular processes and motility until the level of organisms. These are ATPases that utilize the chemical energy released by ATP hydrolysis to bring about conformational changes leading to a motor function. Myosins are important as they are involved in almost all cellular activities ranging from cell division to transcriptional regulation. They are crucial due to their involvement in many congenital diseases symptomatized by muscular malfunctions, cardiac diseases, deafness, neural and immunological dysfunction, and so on, many of which lead to death at an early age. We present Myosinome, a database of selected myosin classes (myosin II, V, and VI) from five model organisms. This knowledge base provides the sequences, phylogenetic clustering, domain architectures of myosins and molecular models, structural analyses, and relevant literature of their coiled-coil domains. In the current version of Myosinome, information about 71 myosin sequences belonging to three myosin classes (myosin II, V, and VI) in five model organisms (Homo Sapiens, Mus musculus, D. melanogaster, C. elegans and S. cereviseae) identified using bioinformatics surveys are presented, and several of them are yet to be functionally characterized. As these proteins are involved in congenital diseases, such a database would be useful in short-listing candidates for gene therapy and drug development. The database can be accessed from http://caps.ncbs.res.in/myosinome.

Bioinform Biol Insights. 2012:6() | 6 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
6208/6895 (9.978%)
Structure:
869/967 (10.238%)
6208
Total Rank
6
Citations
0.462
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Record metadata

Created on: 2018-01-29
Curated by:
Pei Wang [2018-03-27]
Pei Wang [2018-02-24]