Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

GenProtEC

General information

URL: http://mbl.edu/html/ecoli
Full name: Genes and proteins of Escherichia coli K-12
Description: GenProtEC is a database of Escherichia coli genes and their gene products, classified by type of function and physiological role and with citations to the literature for each.
Year founded: 1996
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: United States

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Marine Biology Laboratory
Address:
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): Monica Riley
Contact email (PI/Helpdesk): mriley@mbl.edu

Publications

9399799
Genes and proteins of Escherichia coli K-12. [PMID: 9399799]
Riley M.

GenProtEC is a database of Escherichia coli genes and their gene products, classified by type of function and physiological role and with citations to the literature for each. Also present are data on sequence similarities among E.coli proteins, representing groups of paralogous genes, with PAM values, percent identity of amino acids, length of alignment and percent aligned. GenProtEC can be accessed at the URL http://www.mbl.edu/html/ecoli.html

Nucleic Acids Res. 1998:26(1) | 34 Citations (from Europe PMC, 2026-05-09)
9016503
Genes and proteins of Escherichia coli K-12 (GenProtEC). [PMID: 9016503]
Riley M.

GenProtEC is a database of Escherichia coli genes and their gene products, classified by type of function and physiological role and with citations to the literature for each. Also present are data on sequence similarities amongE.coliproteins with PAM values, percent identity of amino acids, length of alignment and percent aligned. GenProtEC can also be accessed through the World Wide Web at URL http://mbl.edu/html/ecoli.html .

Nucleic Acids Res. 1997:25(1) | 17 Citations (from Europe PMC, 2026-05-09)
8594596
Genes and proteins of Escherichia coli (GenProtEc). [PMID: 8594596]
Riley M, Space DB.

GenProtEc is a database of Escherichia coli genes and their gene products, classified by type of function and physiological role and with citations to the literature for each. Also present are data on sequence similarities among E.coli proteins with PAM values, percent identity of amino acids, length of alignment and percent aligned. The database is available as a PKZip file by ftp from mbl.edu/pub/ecoli.exe. The program runs under MS-DOS on IMB-compatible machines. GenProtEc can also be accessed through the World Wide Web at URL http://mbl.edu/html/ecoli.html.

Nucleic Acids Res. 1996:24(1) | 11 Citations (from Europe PMC, 2026-05-09)

Ranking

All databases:
3831/6932 (44.749%)
Gene genome and annotation:
1176/2041 (42.43%)
3831
Total Rank
61
Citations
2.033
z-index

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Not Rated
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Record metadata

Created on: 2018-02-08
Curated by:
Mengyu Pan [2018-09-21]
Yang Zhang [2018-02-23]
Pei Wang [2018-02-08]