Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

smallRNAdb

General information

URL: http://mbcr.bcm.tmc.edu/smallRNA/smallrna
Full name: small RNA database
Description: The small RNA database is a compilation of all the small size RNA sequences available to date, including nuclear, nucleolar, cytoplasmic and mitochondrial small RNAs from eukaryotic organisms and small RNAs from prokaryotic cells as well as viruses.
Year founded: 1996
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: United States

Classification & Tag

Data type:
RNA
Data object:
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: Baylor College of Medicine
Address:
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): Ram Reddy
Contact email (PI/Helpdesk): rreddy@bcm.tmc.edu

Publications

9399823
Small RNA database. [PMID: 9399823]
Gu J, Chen Y, Reddy R.

The small RNA database is a compilation of all the small size RNA sequences available to date, including nuclear, nucleolar, cytoplasmic and mitochondria small RNAs from eukaryotic organisms and small RNAs from prokaryotic cells as well as viruses. Currently, approximately 600 small RNA sequences are in our database. It also gives the sources of individual RNAs and their GenBank accession numbers. The small RNA database can be accessed through the WWW (World Wide Web). Our WWW URL address is: http://mbcr.bcm.tmc. edu/smallRNA/smallrna.html . The new small RNA sequences published since our last compilation are listed in this paper (Table 1).

Nucleic Acids Res. 1998:26(1) | 14 Citations (from Europe PMC, 2025-12-13)
9016511
Small RNA database. [PMID: 9016511]
Gu J, Reddy R.

The small RNA database is a compilation of all the small size RNA sequences available to date, including nuclear, nucleolar, cytoplasmic and mitochondrial small RNAs from eukaryotic organisms and small RNAs from prokaryotic cells as well as viruses. Currently, about 600 small RNA sequences are in our database. It also gives the sources of individual RNAs and their GenBank accession numbers. The small RNA database can be accessed through WWW(World Wide Web). Our WWW URL address is: http://mbcr.bcm.tmc.edu/smallRNA/smallrna. html . The new small RNA sequences published since our last compilation are listed in this paper.

Nucleic Acids Res. 1997:25(1) | 4 Citations (from Europe PMC, 2025-12-13)
8594605
Small RNA database. [PMID: 8594605]
Gu J, Reddy R.

The small RNA database is a compilation of all the small size RNA sequences available to date from prokaryotic and eukaryotic organisms. About 500 small RNA sequences are in our database currently. The sources of individual RNAs and their GenBank accession numbers are also included. The small RNA database can be accessed through the World Wide Web(WWW). Our WWW URL is http://mbcr.bcm.tmc.edu/smallRNA/smallrna. html. The new small RNA sequences published since our last compilation are listed in this paper.

Nucleic Acids Res. 1996:24(1) | 6 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
5613/6895 (18.608%)
Expression:
1135/1347 (15.813%)
5613
Total Rank
24
Citations
0.828
z-index

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Record metadata

Created on: 2018-02-08
Curated by:
huma shireen [2018-08-30]
Yang Zhang [2018-03-26]
Yang Zhang [2018-02-23]
Pei Wang [2018-02-08]