| URL: | http://rrna.uia.ac.be/ssu |
| Full name: | The Antwerp database on small ribosomal |
| Description: | The Antwerp database on small ribosomal subunit RNA now offers more than 6000 nucleotide sequences. |
| Year founded: | 1997 |
| Last update: | |
| Version: | |
| Accessibility: |
Unaccessible
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| Country/Region: | Belgium |
| Data type: | |
| Data object: | |
| Database category: | |
| Major species: |
NA
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| Keywords: |
| University/Institution: | University of Antwerp |
| Address: | |
| City: | |
| Province/State: | |
| Country/Region: | Belgium |
| Contact name (PI/Team): | Rupert De Wachter |
| Contact email (PI/Helpdesk): | dwachter@uia.ua.ac.be |
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The European database on small subunit ribosomal RNA. [PMID: 11752288]
The European database on SSU rRNA can be consulted via the World WideWeb at http://rrna.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available. |
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The European small subunit ribosomal RNA database. [PMID: 10592217]
The European database of the Small Subunit (SSU) Ribosomal RNA is a curated database that strives to collect all information about the primary and secondary structure of completely or nearly-completely sequenced rRNAs. Furthermore, the database compiles additional information such as literature references and taxonomic status of the organism the sequence was derived from. The database can be consulted via the WWW at URL http://rrna.uia.ac.be/ssu/. Through the WWW, sequences can be easily selected either one by one, by taxonomic group, or by a combination of both, and can be retrieved in different sequence and alignment formats. |
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Database on the structure of small subunit ribosomal RNA. [PMID: 9847173]
Over 11 500 complete or nearly complete sequences are now available from the Antwerp database on small subunit ribosomal RNA. All these sequences are aligned with one another on the basis of the adopted secondary structure model, which is corroborated by the observation of compensating substitutions in the alignment. Literature references, accession numbers and taxonomic information are also compiled. The database can be consulted via the World Wide Web at URL http://rrna.uia.ac.be/ssu/ |
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Database on the structure of small ribosomal subunit RNA. [PMID: 9399829]
About 8600 complete or nearly complete sequences are now available from the Antwerp database on small ribosomal subunit RNA. All these sequences are aligned with one another on the basis of the adopted secondary structure model, which is corroborated by the observation of compensating substitutions in the alignment. Literature references, accession numbers and detailed taxonomic information are also compiled. The database can be consulted via the World Wide Web at URL http://rrna.uia.ac.be/ssu/ |
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Database on the structure of small ribosomal subunit RNA. [PMID: 9016516]
The Antwerp database on small ribosomal subunit RNA now offers more than 6000 nucleotide sequences (August 1996). All these sequences are stored in the form of an alignment based on the adopted secondary structure model, which is corroborated by the observation of compensating substitutions in the alignment. Besides the primary and secondary structure information, literature references, accession numbers and detailed taxonomic information are also compiled. For ease of use, the complete database is made available to the scientific community via World Wide Web at URL http://rrna.uia.ac.be/ssu/ . |