Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CnidBase

General information

URL: http://cnidbase.bu.edu
Full name: Cnidarian Evolutionary Genomics Database
Description: CnidBase, the Cnidarian Evolutionary Genomics Database, is a tool for investigating the evolutionary, developmental and ecological factors that affect gene expression and gene function in cnidarians. In turn, CnidBase will help to illuminate the role of specific genes in shaping cnidarian biodiversity in the present day and in the distant past. CnidBase highlights evolutionary changes between species within the phylum Cnidaria and structures genomic and expression data to facilitate comparisons to non-cnidarian metazoans.
Year founded: 2003
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: United States

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Boston University
Address: Boston University
City: Boston
Province/State:
Country/Region: United States
Contact name (PI/Team): Joseph F. Ryan
Contact email (PI/Helpdesk): jfryan@bu.edu

Publications

12519972
CnidBase: The Cnidarian Evolutionary Genomics Database. [PMID: 12519972]
Ryan JF, Finnerty JR.

CnidBase, the Cnidarian Evolutionary Genomics Database, is a tool for investigating the evolutionary, developmental and ecological factors that affect gene expression and gene function in cnidarians. In turn, CnidBase will help to illuminate the role of specific genes in shaping cnidarian biodiversity in the present day and in the distant past. CnidBase highlights evolutionary changes between species within the phylum Cnidaria and structures genomic and expression data to facilitate comparisons to non-cnidarian metazoans. CnidBase aims to further the progress that has already been made in the realm of cnidarian evolutionary genomics by creating a central community resource which will help drive future research and facilitate more accurate classification and comparison of new experimental data with existing data. CnidBase is available at http://cnidbase.bu.edu/.

Nucleic Acids Res. 2003:31(1) | 10 Citations (from Europe PMC, 2026-05-23)

Ranking

All databases:
6190/6931 (10.706%)
Gene genome and annotation:
1855/2040 (9.118%)
Phylogeny and homology:
273/305 (10.82%)
Expression:
1238/1363 (9.244%)
6190
Total Rank
10
Citations
0.435
z-index

Community reviews

Not Rated
Data quality & quantity:
Content organization & presentation
System accessibility & reliability:

Word cloud

Related Databases

Citing
Cited by

Record metadata

Created on: 2018-02-09
Curated by:
Mengyu Pan [2018-09-21]
Qi Wang [2018-02-22]