Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

LOID

General information

URL: http://www.le.ac.uk/genetics/collagen
Full name: The Lithuanian OI database
Description: This database aims to record all published accounts of variants resulting in osteogenesis imperfecta.
Year founded: 1998
Last update: 2017
Version:
Accessibility:
Accessible
Country/Region: Lithuania

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: University of Leicester
Address:
City:
Province/State:
Country/Region: Lithuania
Contact name (PI/Team): Vaidutis Kucinskas
Contact email (PI/Helpdesk): Vaidutis.Kucinskas@santa.lt

Publications

12590186
COL1A1 mutation analysis in Lithuanian patients with osteogenesis imperfecta. [PMID: 12590186]
Benusiené E, Kucinskas V.

Osteogenesis imperfecta (OI) is a generalised disorder of connective tissue characterised by an increased fragility of bones and also manifested in other tissues containing collagen type I, by blue sclera, hearing loss, dentinogenesis imperfecta, hyperextensible joints, hernias and easy bruising. OI is dominantly inherited and results in >90% OI cases, caused by mutations in one of the two genes COL1A1 or COL1A2 coding for type I procollagen. The Lithuanian OI database comprises 147 case records covering the period of 1980 - 2001. Clinical and genealogical analysis of OI cases/families from Lithuania available for examination revealed 18 familial cases of OI type I and 22 sporadic cases: OI type II (3 cases), OI type III (11 cases) and OI type I (8 cases). As a result of their molecular genetic investigation, 11 mutations were identified in the COL1A1 gene in 13 unrelated patients. Of them, nine mutations (E500X, G481A, c.2046insCTCTCTAG, c.1668delT, c.1667insC, c.4337insC, IVS19+1G > A, IVS20-2A > G, IVS22-1G > T) appeared to be novel, i.e. not yet registered in the Human Type I and Type III Collagen Mutations Database (http://www.le.ac.uk/genetics/collagen).

J Appl Genet. 2003:44(1) | 22 Citations (from Europe PMC, 2025-12-20)
9399846
The Human Collagen Mutation Database 1998. [PMID: 9399846]
Dalgleish R.

The collagens are a large and diverse family of proteins which are found in the extracellular matrix. In common with one another, the 19 known collagen types have triple-helical domains of variable length but they differ with respect to their overall size and the nature and location of their globular domains. Collagen mutations lead to heritable defects of connective tissues and mutation data for collagen types I and III are presented here. The mutation data are accessible on the world wide web at http://www.le.ac.uk/genetics/collagen/

Nucleic Acids Res. 1998:26(1) | 155 Citations (from Europe PMC, 2025-12-20)

Ranking

All databases:
2018/6895 (70.747%)
Health and medicine:
503/1738 (71.116%)
2018
Total Rank
173
Citations
6.407
z-index

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Record metadata

Created on: 2018-02-09
Curated by:
Mengyu Pan [2018-09-26]
Yang Zhang [2018-02-24]
Pei Wang [2018-02-09]