Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

ACEDB

General information

URL: http://geo.nihs.go.jp/csndb
Full name: A database for cell signaling networks.
Description: The database includes attractive graphical representations of signaling cascades and the three-dimensional structure of molecules, which was the database originally developed to store the C. elegans genome.
Year founded: 1998
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: Japan

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: National Institute of Health Sciences
Address:
City:
Province/State:
Country/Region: Japan
Contact name (PI/Team): T Kaminuma
Contact email (PI/Helpdesk): taka@nihs.go.jp

Publications

10072089
A database for cell signaling networks. [PMID: 10072089]
Takai-Igarashi T, Nadaoka Y, Kaminuma T.

We developed a data and knowledge base for cellular signal transduction in human cells, to make this rapidly growing information available. The database includes all the biological properties of cellular signal transduction, including biological reactions that transfer cellular signals and molecular attributes characterized by sequences, structures, and functions. Since the database is based on the object-oriented technique, highly flexible methods of data definition and modification are necessary to handle this diverse and complex biological information. The database includes attractive graphical representations of signaling cascades and the three-dimensional structure of molecules. The database is a novel application of ACEDB, which was the database originally developed to store the C. elegans genome. The database can be accessed through the Internet at http://geo.nihs.go.jp/csndb.html.

J Comput Biol. 1998:5(4) | 24 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
5538/6895 (19.695%)
Structure:
762/967 (21.303%)
5538
Total Rank
24
Citations
0.889
z-index

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Record metadata

Created on: 2018-02-09
Curated by:
Yang Zhang [2018-02-24]
Pei Wang [2018-02-09]