Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

MOsDB

General information

URL: http://mips.gsf.de/proj/rice
Full name: The MIPS Rice (Oryza sativa) database
Description: The MIPS Rice (Oryza sativa) database (MOsDB) provides a comprehensive data collection dedicated to the genome information of rice. MOsDB integrates data from two publicly available rice genomic sequences, O. sativa L. ssp. indica and O. sativa L. ssp. japonica. Besides regularly updated rice genome sequence information, MOsDB provides an integrated resource for associated analysis data, e.g. internal and external annotation information as well as a complex characterization of all annotated rice genes.
Year founded: 2003
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: Germany

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: MIPS/Institute for Bioinformatics
Address: MIPS/Institute for Bioinformatics, GSF National Research Center for Environment and Health, Ingolstaedter Landstrasse 1, 85764 Neuherberg, Germany.
City: Neuherberg
Province/State:
Country/Region: Germany
Contact name (PI/Team): Klaus F. X. Mayer
Contact email (PI/Helpdesk): k.mayer@gsf.de

Publications

12519979
MOsDB: an integrated information resource for rice genomics. [PMID: 12519979]
Karlowski WM, Schoof H, Janakiraman V, Stuempflen V, Mayer KF.

The MIPS Rice (Oryza sativa) database (MOsDB; http://mips.gsf.de/proj/rice) provides a comprehensive data collection dedicated to the genome information of rice. Rice (O. sativa L.) is one of the most important food crops for over half the world's population and serves as a major model system in cereal genome research. MOsDB integrates data from two publicly available rice genomic sequences, O. sativa L. ssp. indica and O. sativa L. ssp. japonica. Besides regularly updated rice genome sequence information, MOsDB provides an integrated resource for associated analysis data, e.g. internal and external annotation information as well as a complex characterization of all annotated rice genes. The MOsDB web interface supports various search options and allows browsing the database content. MOsDB is continuously expanding to include an increasing range of data type and the growing amount of information on the rice genome.

Nucleic Acids Res. 2003:31(1) | 15 Citations (from Europe PMC, 2026-06-13)

Ranking

All databases:
5737/6932 (17.253%)
Raw bio-data:
471/587 (19.932%)
Gene genome and annotation:
1720/2040 (15.735%)
5737
Total Rank
15
Citations
0.652
z-index

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Record metadata

Created on: 2018-02-09
Curated by:
Mengyu Pan [2018-09-21]
Qi Wang [2018-02-23]
Yang Zhang [2018-02-09]