Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

Apoptosis-db

General information

URL: NA
Full name: The apoptosis database
Description: The apoptosis database is a public resource for researchers and students interested in the molecular biology of apoptosis. The resource provides functional annotation, literature references, diagrams/images, and alternative nomenclatures on a set of proteins having 'apoptotic domains'.
Year founded: 2003
Last update: 2017
Version:
Accessibility:
Unaccessible
Country/Region: United States

Contact information

University/Institution: Burnham Institute
Address: The Burnham Institute, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA
City: La Jolla
Province/State: CA
Country/Region: United States
Contact name (PI/Team): P E Bourne
Contact email (PI/Helpdesk): bourne@sdsc.edu

Publications

12761571
The apoptosis database. [PMID: 12761571]
Doctor KS, Reed JC, Godzik A, Bourne PE.

The apoptosis database is a public resource for researchers and students interested in the molecular biology of apoptosis. The resource provides functional annotation, literature references, diagrams/images, and alternative nomenclatures on a set of proteins having 'apoptotic domains'. These are the distinctive domains that are often, if not exclusively, found in proteins involved in apoptosis. The initial choice of proteins to be included is defined by apoptosis experts and bioinformatics tools. Users can browse through the web accessible lists of domains, proteins containing these domains and their associated homologs. The database can also be searched by sequence homology using basic local alignment search tool, text word matches of the annotation, and identifiers for specific records. The resource is available at http://www.apoptosis-db.org and is updated on a regular basis.

Cell Death Differ. 2003:10(6) | 22 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
5190/6895 (24.743%)
Raw bio-data:
414/582 (29.038%)
Gene genome and annotation:
1559/2021 (22.909%)
Standard ontology and nomenclature:
177/238 (26.05%)
Literature:
438/577 (24.263%)
5190
Total Rank
22
Citations
1
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Record metadata

Created on: 2018-02-09
Curated by:
Lin Liu [2022-08-20]
Mengyu Pan [2018-09-21]
Qi Wang [2018-02-24]
Yang Zhang [2018-02-09]