Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

GenePaint.org

General information

URL: http://www.genepaint.org/Frameset.html
Full name: an atlas of gene expression patterns in the mouse embryo
Description: GenePaint.org is a digital atlas of gene expression patterns in the mouse. This relational database is searchable for gene identifiers and RNA probe sequences. Moreover, patterns and intensity of expression in approximately 100 different embryonic tissues are annotated and can be searched using a standardized catalog of anatomical structures.
Year founded: 2004
Last update:
Version:
Accessibility:
Accessible
Country/Region: Germany

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Max Planck Institute of Experimental Endocrinology
Address:
City:
Province/State:
Country/Region: Germany
Contact name (PI/Team): Axel Visel
Contact email (PI/Helpdesk): Gregor.Eichele@mpihan.mpg.de

Publications

14681479
GenePaint.org: an atlas of gene expression patterns in the mouse embryo. [PMID: 14681479]
Visel A, Thaller C, Eichele G.

High-throughput instruments were recently developed to determine gene expression patterns on tissue sections by RNA in situ hybridization. The resulting images of gene expression patterns, chiefly of E14.5 mouse embryos, are accessible to the public at http://www.genepaint.org. This relational database is searchable for gene identifiers and RNA probe sequences. Moreover, patterns and intensity of expression in approximately 100 different embryonic tissues are annotated and can be searched using a standardized catalog of anatomical structures. A virtual microscope tool, the Zoom Image Server, was implemented in GenePaint.org and permits interactive zooming and panning across approximately 15,000 high-resolution images.

Nucleic Acids Res. 2004:32(Database issue) | 420 Citations (from Europe PMC, 2026-01-10)

Ranking

All databases:
748/6933 (89.225%)
Gene genome and annotation:
257/2040 (87.451%)
Expression:
127/1361 (90.742%)
748
Total Rank
420
Citations
19.091
z-index

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Record metadata

Created on: 2018-02-09
Curated by:
Hao Zhang [2018-03-01]
Yang Zhang [2018-02-09]