Database Commons

a catalog of biological databases

e.g., animal; RNA; Methylation; China

Database Profile

General information

URL: http://ecoliwiki.net
Full name: EcoliWiki
Description: EcoliWiki is the community annotation component of the PortEco project,an online data resource that integrates information on laboratory strains of Escherichia coli,its phages,plasmids and mobile genetic elements.
Year founded: 2011
Last update: 11/24/2014
Version: v1.0
Accessibility:
Manual:
Accessible
Real time : Checking...
Country/Region: United States
Data type:
Data object:
Database category:
Major organism:
Keywords:

Contact information

University/Institution: Texas Agrilife Research
Address: Department of Biochemistry and Biophysics,Texas Agrilife Research,College Station,TX 77843,USA
City: College Station
Province/State: TX
Country/Region: United States
Contact name (PI/Team): James C. Hu
Contact email (PI/Helpdesk): jimhu@tamu.edu

Publications

22064863
EcoliWiki: a wiki-based community resource for Escherichia coli. [PMID: 22064863]
McIntosh BK, Renfro DP, Knapp GS, Lairikyengbam CR, Liles NM, Niu L, Supak AM, Venkatraman A, Zweifel AE, Siegele DA, Hu JC.

EcoliWiki is the community annotation component of the PortEco (http://porteco.org; formerly EcoliHub) project, an online data resource that integrates information on laboratory strains of Escherichia coli, its phages, plasmids and mobile genetic elements. As one of the early adopters of the wiki approach to model organism databases, EcoliWiki was designed to not only facilitate community-driven sharing of biological knowledge about E. coli as a model organism, but also to be interoperable with other data resources. EcoliWiki content currently covers genes from five laboratory E. coli strains, 21 bacteriophage genomes, F plasmid and eight transposons. EcoliWiki integrates the Mediawiki wiki platform with other open-source software tools and in-house software development to extend how wikis can be used for model organism databases. EcoliWiki can be accessed online at http://ecoliwiki.net.

Nucleic Acids Res. 2012:40(Database issue) | 21 Citations (from Europe PMC, 2022-01-15)

Ranking

All databases:
2549/5050 (49.545%)
Gene genome and annotation:
747/1337 (44.203%)
2549
Total Rank
21
Citations
2.1
z-index

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Not Rated
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Word cloud

Record metadata

Created on: 2015-06-20
Curated by:
Lina Ma [2018-06-14]
Jian Sang [2016-04-04]
Jian Sang [2015-12-08]
Jian Sang [2015-06-27]