| URL: | https://genomevolution.org |
| Full name: | Comparative Genomics |
| Description: | an online system for making the retrieval and comparison of genomic information and sequence data quick and easy. |
| Year founded: | 2018 |
| Last update: | |
| Version: | |
| Accessibility: |
Accessible
|
| Country/Region: | United States |
| Data type: | |
| Data object: |
NA
|
| Database category: | |
| Major species: |
NA
|
| Keywords: |
| University/Institution: | University of Arizona |
| Address: | BIO5 Institute, School of Plant Sciences, University of Arizona, Tucson, AZ, USA |
| City: | Tucson |
| Province/State: | |
| Country/Region: | United States |
| Contact name (PI/Team): | Eric Lyons |
| Contact email (PI/Helpdesk): | coge.genome@gmail.com |
|
EPIC-CoGe: managing and analyzing genomic data. [PMID: 29474529]
Summary: The EPIC-CoGe browser is a web-based genome visualization utility that integrates the GMOD JBrowse genome browser with the extensive CoGe genome database (currently containing over 30 000 genomes). In addition, the EPIC-CoGe browser boasts many additional features over basic JBrowse, including enhanced search capability and on-the-fly analyses for comparisons and analyses between all types of functional and diversity genomics data. There is no installation required and data (genome, annotation, functional genomic and diversity data) can be loaded by following a simple point and click wizard, or using a REST API, making the browser widely accessible and easy to use by researchers of all computational skill levels. In addition, EPIC-CoGe and data tracks are easily embedded in other websites and JBrowse instances. |