Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

AmtDB

General information

URL: https://amtdb.org
Full name: Ancient mtDNA database
Description: This is the place where you can find an updated list of the published mitochondrial sequences coming from the ancient DNA samples (aDNA). The main interest of our database lies in the anatomically modern Homo sapiens samples, ranging from the late Paleolithic to roughly Iron Age times, focusing on an Euroasian geographical area.
Year founded: 2019
Last update:
Version:
Accessibility:
Accessible
Country/Region: Czech Republic

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Institute of Molecular Genetics, Academy of Sciences of the Czech Republic
Address:
City: Prague
Province/State:
Country/Region: Czech Republic
Contact name (PI/Team): Edvard Ehler
Contact email (PI/Helpdesk): edvard.ehler@img.cas.cz

Publications

30247677
AmtDB: a database of ancient human mitochondrial genomes. [PMID: 30247677]
Ehler E, Ehler E, Novotný J, Juras A, Chylenski M, Moravcík O, Paces J.

Ancient mitochondrial DNA is used for tracing human past demographic events due to its population-level variability. The number of published ancient mitochondrial genomes has increased in recent years, alongside with the development of high-throughput sequencing and capture enrichment methods. Here, we present AmtDB, the first database of ancient human mitochondrial genomes. Release version contains 1107 hand-curated ancient samples, freely accessible for download, together with the individual descriptors, including geographic location, radiocarbon dating, and archaeological culture affiliation. The database also features an interactive map for sample location visualization. AmtDB is a key platform for ancient population genetic studies and is available at https://amtdb.org.

Nucleic Acids Res. 2019:47(D1) | 32 Citations (from Europe PMC, 2026-03-28)

Ranking

All databases:
2549/6932 (63.243%)
Gene genome and annotation:
790/2039 (61.305%)
Metadata:
252/723 (65.284%)
2549
Total Rank
28
Citations
4
z-index

Community reviews

Not Rated
Data quality & quantity:
Content organization & presentation
System accessibility & reliability:

Word cloud

Related Databases

Citing
Cited by

Record metadata

Created on: 2019-01-03
Curated by:
Dong Zou [2019-01-09]
Dong Zou [2019-01-03]