Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

LOGpc

General information

URL: http://bioinfo.henu.edu.cn/DatabaseList.jsp
Full name: Long-term Outcome and Gene Expression Profiling Database of pan-cancers
Description: Long-term Outcome and Gene Expression Profiling Database of pan-cancers ) encompasses 171 expression datasets, provides 13 types of survival terms for 27625 patients of 26 distinct malignancies.
Year founded: 2019
Last update:
Version:
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Henan University
Address: Department of Preventive Medicine, Institute of Biomedical Informatics, Joint National Laboratory for Antibody Drug Engineering, Cell Signal Transduction Laboratory, Bioinformatics Center, School of Software, School of Basic Medical Sciences, Henan University, Kaifeng, China
City: Kaifeng
Province/State: Henan
Country/Region: China
Contact name (PI/Team): Xiangqian Guo
Contact email (PI/Helpdesk): xqguo@henu.edu.cn

Publications

30984618
OSlms: A Web Server to Evaluate the Prognostic Value of Genes in Leiomyosarcoma. [PMID: 30984618]
Qiang Wang, Longxiang Xie, Yifang Dang, Xiaoxiao Sun, Tiantian Xie, Jinshuai Guo, Yali Han, Zhongyi Yan, Wan Zhu, Yunlong Wang, Wei Li, Xiangqian Guo

The availability of transcriptome data and clinical annotation offers the opportunity to identify prognosis biomarkers in cancer. However, efficient online prognosis analysis tools are still lacking. Herein, we developed a user-friendly web server, namely nline consensus urvival analysis of eioyoarcoma (OSlms), to centralize published gene expression data and clinical datasets of leiomyosarcoma (LMS) patients from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). OSlms comprises of a total of 268 samples from three independent datasets, and employs the Kaplan Meier survival plot with hazard ratio (HR) and log rank test to estimate the prognostic potency of genes of interests for LMS patients. Using OSlms, clinicians and basic researchers could determine the prognostic significance of genes of interests and get opportunities to identify novel potential important molecules for LMS. OSlms is free and publicly accessible at http://bioinfo.henu.edu.cn/LMS/LMSList.jsp.

Front Oncol. 2019:9() | 22 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
2938/6895 (57.404%)
Expression:
610/1347 (54.788%)
Health and medicine:
741/1738 (57.422%)
2938
Total Rank
22
Citations
3.667
z-index

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Record metadata

Created on: 2019-09-27
Curated by:
Dong Zou [2021-10-22]
furrukh mehmood [2019-10-21]
furrukh mehmood [2019-09-27]