Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

SPTEdb

General information

URL: http://genedenovoweb.ticp.net
Full name: a database for transposable elements in salicaceous plants
Description: SPTEdb enables users to browse, retrieve and download the TEs sequences from the database. Meanwhile, several analysis tools, including BLAST, HMMER, GetORF and Cut sequence, were also integrated into SPTEdb to help users to mine the TEs data easily and effectively. In summary, SPTEdb will facilitate the study of TEs biology and functional genomics in salicaceous plants.
Year founded: 2018
Last update:
Version:
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: Chinese Academy of Forestry
Address: Junhui Wang, Ph.D.&Professor State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China. Email, wangjh808@sina.com
City: Beijing
Province/State: Beijing
Country/Region: China
Contact name (PI/Team): Junhui Wang
Contact email (PI/Helpdesk): wangjh808@sina.com

Publications

29688371
SPTEdb: a database for transposable elements in salicaceous plants. [PMID: 29688371]
Fei Yi, Zirui Jia, Yao Xiao, Wenjun Ma, Junhui Wang

Database URL: http://genedenovoweb.ticp.net:81/SPTEdb/index.php.

Database (Oxford). 2018:2018() | 9 Citations (from Europe PMC, 2026-03-28)

Ranking

All databases:
4923/6932 (28.996%)
Gene genome and annotation:
1484/2039 (27.268%)
4923
Total Rank
9
Citations
1.125
z-index

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Not Rated
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Record metadata

Created on: 2019-10-26
Curated by:
Dong Zou [2021-10-22]
irfan Hussain [2019-11-18]
irfan Hussain [2019-10-26]