Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

CeleryDB

General information

URL: http://apiaceae.njau.edu.cn/celerydb
Full name:
Description: CeleryDB, contains sequences of the whole genome, nucleotide sequences of the predicted genes and amino acid sequences of the predicted proteins of Apium graveolens.
Year founded: 2018
Last update:
Version:
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Nanjing Agricultural University
Address: College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
City: Nanjing
Province/State: Jiangsu
Country/Region: China
Contact name (PI/Team): Ai-Sheng Xiong
Contact email (PI/Helpdesk): xiongaisheng@njau.edu.cn

Publications

29992323
CeleryDB: a genomic database for celery. [PMID: 29992323]
Kai Feng, Xi-Lin Hou, Meng-Yao Li, Qian Jiang, Zhi-Sheng Xu, Jie-Xia Liu, Ai-Sheng Xiong

Celery (Apium graveolens L.) is a plant belonging to the Apiaceae family, and a popular vegetable worldwide because of its abundant nutrients and various medical functions. Although extensive genetic and molecular biological studies have been conducted on celery, its genomic data remain unclear. Given the significance of celery and the growing demand for its genomic data, the whole genome of 'Q2-JN11' celery (a highly inbred line obtained by artificial selfing of 'Jinnan Shiqin') was sequenced using HiSeq 2000 sequencing technology. For the convenience of researchers to study celery, an online database of the whole-genome sequences of celery, CeleryDB, was constructed. The sequences of the whole genome, nucleotide sequences of the predicted genes and amino acid sequences of the predicted proteins are available online on CeleryDB. Home, BLAST, Genome Browser, Transcription Factor and Download interfaces composed of the organizational structure of CeleryDB. Users can search the celery genomic data by using two user-friendly query tools: basic local alignment search tool and Genome Browser. In the future, CeleryDB will be constantly updated to satisfy the needs of celery researchers worldwide.Database URL: http://apiaceae.njau.edu.cn/celerydb.

Database (Oxford). 2018:2018() | 17 Citations (from Europe PMC, 2025-12-13)

Ranking

All databases:
3724/6895 (46.004%)
Gene genome and annotation:
1144/2021 (43.444%)
3724
Total Rank
17
Citations
2.429
z-index

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Record metadata

Created on: 2019-10-27
Curated by:
Shoaib Saleem [2019-11-24]
irfan Hussain [2019-10-27]