Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

RicyerDB

General information

URL: http://server.malab.cn/Ricyer/index.html
Full name: The Rice Yield-related Database
Description: RicyerDB is an integrative genomics and proteomics database for rice (Oryza sativa L.) aimed to complement with related research of influence rice yield in multiple traits by manually curating the related databases and literature. contains basic features information of yield-related genes, such as data sources, gene symbols, aliases, UniProt entry, protein sequence, chromosomal location, traits, causes and references.
Year founded: 2018
Last update:
Version:
Accessibility:
Unaccessible
Country/Region: China

Classification & Tag

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Contact information

University/Institution: Tianjin University
Address: School of Computer Science and Technology, Tianjin University, Tianjin, 300354, China.
City: Tianjin
Province/State: Tianjin
Country/Region: China
Contact name (PI/Team): Quan Zou
Contact email (PI/Helpdesk): zouquan@tju.edu.cn

Publications

29989091
RicyerDB: A Database For Collecting Rice Yield-related Genes with Biological Analysis. [PMID: 29989091]
Jing Jiang, Fei Xing, Xiangxiang Zeng, Quan Zou

The Rice Yield-related Database (RicyerDB) was created to complement with related research of influence rice (Oryza sativa L.) yield in multiple traits by manually curating the related databases and literature, and genomics and proteomics information that could be useful for comprehensive understanding of the rice biology. RicyerDB provides a more valuable resource in which to efficiently investigate, browse and analyze yield-related genes. The whole data set can be easily queried and downloaded through the webpage. In addition, RicyerDB also constructed a protein-protein interaction network with biological analysis. The combined rice database opens a new path to facilitate researchers achieving information on rice gene in terms of their effects on traits important for rice breeding. The web server is freely available at: http://server.malab.cn/Ricyer/index.html.

Int. J. Biol. Sci.. 2018:14(8) | 14 Citations (from Europe PMC, 2026-03-28)

Ranking

All databases:
4155/6932 (40.075%)
Interaction:
764/1200 (36.417%)
Literature:
357/577 (38.302%)
4155
Total Rank
14
Citations
1.75
z-index

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Record metadata

Created on: 2019-10-28
Curated by:
Yuanyuan Cheng [2024-01-03]
furrukh mehmood [2019-11-12]
Shoaib Saleem [2019-10-28]