| URL: | http://2de-pattern.pnpi.nrcki.ru |
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| Description: | 2DE-pattern contains data on proteins/isoforms/proteoforms identified on various 2DE maps. You can locate these proteoforms on the classical 2DE maps,the sectional 2DE maps, or the semi-virtual 2DE maps. |
| Year founded: | 2020 |
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| Accessibility: |
Accessible
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| Country/Region: | Russian Federation |
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| University/Institution: | National Research Center |
| Address: | B.P. Konstantinov Petersburg Nuclear Physics Institute, National Research Center "Kurchatov Institute", Gatchina, Russia. |
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| Country/Region: | Russian Federation |
| Contact name (PI/Team): | Stanislav Naryzhny |
| Contact email (PI/Helpdesk): | snaryzhny@mail.ru |
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A database for inventory of proteoform profiles: "2DE-pattern". [PMID: 32307725]
The human proteome is composed of a diverse and heterogeneous range of gene products/proteoforms/protein species. Because of the growing amount of information about proteoforms generated by different methods, we need a convenient approach to make an inventory of the data. Here, we present a database of proteoforms that is based on information obtained by separation of proteoforms using 2DE followed by shotgun ESI-LC-MS/MS. The database's principles and structure are described. The database is called "2DE-pattern" as it contains multiple isoform-centric patterns of proteoforms separated according to 2DE principles. The database can be freely used at http://2de-pattern.pnpi.nrcki.ru. |